Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PER3P56645 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PER3P56645 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PER3P56645 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.24■□□□□ 0.19
PER3P56645 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PER3P56645 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.24■□□□□ 0.19
PER3P56645 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PER3P56645 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PER3P56645 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.24■□□□□ 0.19
PER3P56645 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PER3P56645 AL391005.1-201ENST00000623953 2435 ntBASIC16.24■□□□□ 0.19
PER3P56645 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PER3P56645 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.24■□□□□ 0.19
PER3P56645 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
PER3P56645 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PER3P56645 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PER3P56645 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.23■□□□□ 0.19
PER3P56645 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 AC098831.1-202ENST00000438821 336 ntBASIC16.23■□□□□ 0.19
PER3P56645 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PER3P56645 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.23■□□□□ 0.19
PER3P56645 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.23■□□□□ 0.19
PER3P56645 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.23■□□□□ 0.19
PER3P56645 MIR3687-2-201ENST00000577708 61 ntBASIC16.23■□□□□ 0.19
PER3P56645 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 MIR3687-1-201ENST00000614492 61 ntBASIC16.23■□□□□ 0.19
PER3P56645 FAM215A-202ENST00000632077 792 ntBASIC16.23■□□□□ 0.19
PER3P56645 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PER3P56645 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PER3P56645 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.23■□□□□ 0.19
PER3P56645 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PER3P56645 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PER3P56645 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PER3P56645 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PER3P56645 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PER3P56645 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PER3P56645 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.22■□□□□ 0.19
PER3P56645 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.22■□□□□ 0.19
PER3P56645 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PER3P56645 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.22■□□□□ 0.19
PER3P56645 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.22■□□□□ 0.19
PER3P56645 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PER3P56645 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.22■□□□□ 0.19
PER3P56645 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.22■□□□□ 0.19
PER3P56645 DNAJB3-201ENST00000446806 729 ntBASIC16.22■□□□□ 0.19
PER3P56645 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.22■□□□□ 0.19
PER3P56645 MTDHP3-201ENST00000594186 672 ntBASIC16.22■□□□□ 0.19
PER3P56645 FAM197Y3-203ENST00000618346 717 ntBASIC16.22■□□□□ 0.19
PER3P56645 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PER3P56645 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
PER3P56645 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 AC126763.1-201ENST00000552015 2118 ntBASIC16.22■□□□□ 0.19
PER3P56645 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.22■□□□□ 0.19
PER3P56645 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.22■□□□□ 0.19
PER3P56645 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PER3P56645 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PER3P56645 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms