Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 AL031284.1-201ENST00000419297 478 ntBASIC18.55■□□□□ 0.56
CACNA2D1P54289 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 RPS2P1-201ENST00000434010 821 ntBASIC18.55■□□□□ 0.56
CACNA2D1P54289 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 SCARNA2-201ENST00000458748 420 ntBASIC18.55■□□□□ 0.56
CACNA2D1P54289 AF186996.4-201ENST00000467186 377 ntBASIC18.55■□□□□ 0.56
CACNA2D1P54289 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 AL139288.1-201ENST00000623748 933 ntBASIC18.55■□□□□ 0.56
CACNA2D1P54289 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNA2D1P54289 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNA2D1P54289 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 AC067852.2-201ENST00000590513 2313 ntBASIC18.55■□□□□ 0.56
CACNA2D1P54289 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CACNA2D1P54289 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNA2D1P54289 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNA2D1P54289 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 AC073648.2-201ENST00000510116 352 ntBASIC18.54■□□□□ 0.56
CACNA2D1P54289 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 MTDHP4-201ENST00000600287 670 ntBASIC18.54■□□□□ 0.56
CACNA2D1P54289 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 FAM215A-202ENST00000632077 792 ntBASIC18.54■□□□□ 0.56
CACNA2D1P54289 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 AC243591.1-201ENST00000452967 1364 ntBASIC18.54■□□□□ 0.56
CACNA2D1P54289 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNA2D1P54289 HCG11-201ENST00000411553 5696 ntBASIC18.54■□□□□ 0.56
CACNA2D1P54289 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNA2D1P54289 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 AC012640.2-201ENST00000561606 901 ntBASIC18.53■□□□□ 0.56
CACNA2D1P54289 AP001005.1-201ENST00000571755 1248 ntBASIC18.53■□□□□ 0.56
CACNA2D1P54289 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.53■□□□□ 0.56
CACNA2D1P54289 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNA2D1P54289 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CACNA2D1P54289 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CACNA2D1P54289 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CACNA2D1P54289 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CACNA2D1P54289 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CACNA2D1P54289 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA2D1P54289 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA2D1P54289 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA2D1P54289 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA2D1P54289 SIGLEC16-201ENST00000599858 1437 ntBASIC18.52■□□□□ 0.56
CACNA2D1P54289 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA2D1P54289 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CACNA2D1P54289 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms