Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GPC3P51654 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
GPC3P51654 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.31■□□□□ 0.68
GPC3P51654 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GPC3P51654 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.31■□□□□ 0.68
GPC3P51654 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.31■□□□□ 0.68
GPC3P51654 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 AC073621.1-201ENST00000392730 636 ntBASIC19.31■□□□□ 0.68
GPC3P51654 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.31■□□□□ 0.68
GPC3P51654 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
GPC3P51654 AL356488.2-201ENST00000602755 427 ntBASIC19.31■□□□□ 0.68
GPC3P51654 Z83851.2-201ENST00000609564 659 ntBASIC19.31■□□□□ 0.68
GPC3P51654 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
GPC3P51654 AL589182.2-201ENST00000619332 1049 ntBASIC19.31■□□□□ 0.68
GPC3P51654 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.31■□□□□ 0.68
GPC3P51654 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
GPC3P51654 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
GPC3P51654 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.31■□□□□ 0.68
GPC3P51654 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
GPC3P51654 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GPC3P51654 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GPC3P51654 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
GPC3P51654 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
GPC3P51654 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.3■□□□□ 0.68
GPC3P51654 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.3■□□□□ 0.68
GPC3P51654 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GPC3P51654 UNC93B6-202ENST00000528242 690 ntBASIC19.3■□□□□ 0.68
GPC3P51654 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC3P51654 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
GPC3P51654 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GPC3P51654 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.29■□□□□ 0.68
GPC3P51654 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GPC3P51654 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.29■□□□□ 0.68
GPC3P51654 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 SIGLEC30P-201ENST00000455569 941 ntBASIC19.29■□□□□ 0.68
GPC3P51654 AC002558.1-201ENST00000488906 803 ntBASIC19.29■□□□□ 0.68
GPC3P51654 IGHV3-52-201ENST00000519770 353 ntBASIC19.29■□□□□ 0.68
GPC3P51654 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.29■□□□□ 0.68
GPC3P51654 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.29■□□□□ 0.68
GPC3P51654 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.29■□□□□ 0.68
GPC3P51654 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GPC3P51654 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC3P51654 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.28■□□□□ 0.68
GPC3P51654 MIR940-201ENST00000401276 94 ntBASIC19.28■□□□□ 0.68
GPC3P51654 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.28■□□□□ 0.68
GPC3P51654 STK19B-204ENST00000512515 211 ntBASIC19.28■□□□□ 0.68
GPC3P51654 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.28■□□□□ 0.68
GPC3P51654 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.28■□□□□ 0.68
GPC3P51654 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms