Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC30.7■■■□□ 2.5
SMARCA2P51531 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC30.7■■■□□ 2.5
SMARCA2P51531 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC30.7■■■□□ 2.5
SMARCA2P51531 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC30.7■■■□□ 2.5
SMARCA2P51531 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC30.7■■■□□ 2.5
SMARCA2P51531 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SMARCA2P51531 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA2P51531 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA2P51531 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA2P51531 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA2P51531 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
SMARCA2P51531 TMPRSS11CP-201ENST00000453277 683 ntBASIC30.69■■■□□ 2.5
SMARCA2P51531 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA2P51531 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC30.69■■■□□ 2.5
SMARCA2P51531 MIR3909-201ENST00000579518 119 ntBASIC30.69■■■□□ 2.5
SMARCA2P51531 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA2P51531 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC30.69■■■□□ 2.5
SMARCA2P51531 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC30.68■■■□□ 2.5
SMARCA2P51531 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
SMARCA2P51531 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA2P51531 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA2P51531 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC30.68■■■□□ 2.5
SMARCA2P51531 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC30.68■■■□□ 2.5
SMARCA2P51531 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC30.68■■■□□ 2.5
SMARCA2P51531 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC30.68■■■□□ 2.5
SMARCA2P51531 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA2P51531 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA2P51531 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA2P51531 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC30.68■■■□□ 2.5
SMARCA2P51531 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA2P51531 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC30.67■■■□□ 2.5
SMARCA2P51531 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC30.67■■■□□ 2.5
SMARCA2P51531 CU639417.3-201ENST00000624240 1404 ntBASIC30.67■■■□□ 2.5
SMARCA2P51531 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC30.67■■■□□ 2.5
SMARCA2P51531 SPTLC1P1-201ENST00000447199 261 ntBASIC30.67■■■□□ 2.5
SMARCA2P51531 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC30.67■■■□□ 2.5
SMARCA2P51531 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA2P51531 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC30.66■■■□□ 2.5
SMARCA2P51531 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC30.66■■■□□ 2.5
SMARCA2P51531 ATP5G2P4-201ENST00000442175 420 ntBASIC30.66■■■□□ 2.5
SMARCA2P51531 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC30.66■■■□□ 2.5
SMARCA2P51531 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC30.66■■■□□ 2.5
SMARCA2P51531 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC30.66■■■□□ 2.5
SMARCA2P51531 AC073592.8-201ENST00000624126 511 ntBASIC30.66■■■□□ 2.5
SMARCA2P51531 AC008267.7-201ENST00000624570 1194 ntBASIC30.66■■■□□ 2.5
SMARCA2P51531 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC30.66■■■□□ 2.5
SMARCA2P51531 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC30.66■■■□□ 2.5
SMARCA2P51531 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC30.66■■■□□ 2.5
SMARCA2P51531 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
SMARCA2P51531 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC30.66■■■□□ 2.5
SMARCA2P51531 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC30.66■■■□□ 2.5
SMARCA2P51531 SPDYE12P-201ENST00000618416 771 ntBASIC30.66■■■□□ 2.5
SMARCA2P51531 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
SMARCA2P51531 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA2P51531 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC30.65■■■□□ 2.5
SMARCA2P51531 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 AC022144.1-201ENST00000602255 1580 ntBASIC30.65■■■□□ 2.5
SMARCA2P51531 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC30.65■■■□□ 2.5
SMARCA2P51531 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC30.65■■■□□ 2.5
SMARCA2P51531 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 ARSEP1-201ENST00000420443 635 ntBASIC30.65■■■□□ 2.5
SMARCA2P51531 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC30.65■■■□□ 2.5
SMARCA2P51531 AL512638.1-201ENST00000457493 794 ntBASIC30.65■■■□□ 2.5
SMARCA2P51531 AC022494.1-201ENST00000466044 728 ntBASIC30.65■■■□□ 2.5
SMARCA2P51531 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC30.65■■■□□ 2.5
SMARCA2P51531 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC30.65■■■□□ 2.5
SMARCA2P51531 COQ4-205ENST00000609948 956 ntTSL 2 BASIC30.65■■■□□ 2.5
SMARCA2P51531 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
SMARCA2P51531 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC30.65■■■□□ 2.5
SMARCA2P51531 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC30.65■■■□□ 2.5
SMARCA2P51531 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA2P51531 HNRNPRP1-201ENST00000453465 1695 ntBASIC30.64■■■□□ 2.5
SMARCA2P51531 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA2P51531 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
SMARCA2P51531 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA2P51531 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC30.64■■■□□ 2.5
SMARCA2P51531 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA2P51531 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA2P51531 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms