Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PSEN1P49768 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.63■□□□□ 0.57
PSEN1P49768 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
PSEN1P49768 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PSEN1P49768 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PSEN1P49768 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.62■□□□□ 0.57
PSEN1P49768 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PSEN1P49768 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.62■□□□□ 0.57
PSEN1P49768 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 SAPCD2P3-201ENST00000455031 850 ntBASIC18.62■□□□□ 0.57
PSEN1P49768 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.62■□□□□ 0.57
PSEN1P49768 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.62■□□□□ 0.57
PSEN1P49768 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.62■□□□□ 0.57
PSEN1P49768 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PSEN1P49768 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSEN1P49768 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.62■□□□□ 0.57
PSEN1P49768 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PSEN1P49768 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.61■□□□□ 0.57
PSEN1P49768 ABALON-201ENST00000629058 1903 ntBASIC18.61■□□□□ 0.57
PSEN1P49768 HCG11-201ENST00000411553 5696 ntBASIC18.61■□□□□ 0.57
PSEN1P49768 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PSEN1P49768 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 AC007967.3-201ENST00000434308 558 ntBASIC18.61■□□□□ 0.57
PSEN1P49768 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC18.61■□□□□ 0.57
PSEN1P49768 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PSEN1P49768 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.61■□□□□ 0.57
PSEN1P49768 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PSEN1P49768 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PSEN1P49768 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSEN1P49768 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.61■□□□□ 0.57
PSEN1P49768 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.6■□□□□ 0.57
PSEN1P49768 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.6■□□□□ 0.57
PSEN1P49768 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PSEN1P49768 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.6■□□□□ 0.57
PSEN1P49768 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.6■□□□□ 0.57
PSEN1P49768 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PSEN1P49768 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.6■□□□□ 0.57
PSEN1P49768 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.6■□□□□ 0.57
PSEN1P49768 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC18.6■□□□□ 0.57
PSEN1P49768 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSEN1P49768 EMBP1-201ENST00000458200 901 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms