Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.12■□□□□ 0.17
SLC1A3P43003 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A3P43003 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A3P43003 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A3P43003 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A3P43003 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A3P43003 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A3P43003 IER3-202ENST00000376377 1350 ntBASIC16.12■□□□□ 0.17
SLC1A3P43003 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A3P43003 AC016734.2-201ENST00000624325 1377 ntBASIC16.12■□□□□ 0.17
SLC1A3P43003 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A3P43003 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A3P43003 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A3P43003 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SLC1A3P43003 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 AC246785.2-201ENST00000432512 513 ntBASIC16.11■□□□□ 0.17
SLC1A3P43003 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A3P43003 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A3P43003 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SLC1A3P43003 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A3P43003 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A3P43003 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A3P43003 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A3P43003 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SLC1A3P43003 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A3P43003 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A3P43003 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC1A3P43003 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A3P43003 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 COX5BP2-201ENST00000392354 334 ntBASIC16.1■□□□□ 0.17
SLC1A3P43003 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.1■□□□□ 0.17
SLC1A3P43003 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A3P43003 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms