Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.72■□□□□ 0.43
HADHAP40939 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 REXO1L11P-201ENST00000620964 1927 ntBASIC17.72■□□□□ 0.43
HADHAP40939 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HADHAP40939 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HADHAP40939 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.72■□□□□ 0.43
HADHAP40939 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.72■□□□□ 0.43
HADHAP40939 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 AP002414.4-201ENST00000589764 1148 ntBASIC17.72■□□□□ 0.43
HADHAP40939 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 AL138831.2-201ENST00000606564 490 ntBASIC17.72■□□□□ 0.43
HADHAP40939 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.72■□□□□ 0.43
HADHAP40939 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.72■□□□□ 0.43
HADHAP40939 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
HADHAP40939 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.72■□□□□ 0.43
HADHAP40939 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.72■□□□□ 0.43
HADHAP40939 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HADHAP40939 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.71■□□□□ 0.43
HADHAP40939 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.71■□□□□ 0.43
HADHAP40939 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HADHAP40939 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.71■□□□□ 0.43
HADHAP40939 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 AP002383.4-201ENST00000442518 975 ntBASIC17.71■□□□□ 0.43
HADHAP40939 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.71■□□□□ 0.43
HADHAP40939 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.71■□□□□ 0.43
HADHAP40939 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 TPSP2-201ENST00000561760 610 ntBASIC17.71■□□□□ 0.43
HADHAP40939 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HADHAP40939 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
HADHAP40939 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HADHAP40939 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.71■□□□□ 0.42
HADHAP40939 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HADHAP40939 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
HADHAP40939 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
HADHAP40939 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HADHAP40939 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.7■□□□□ 0.42
HADHAP40939 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.7■□□□□ 0.42
HADHAP40939 AC233702.3-201ENST00000578656 1387 ntBASIC17.7■□□□□ 0.42
HADHAP40939 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HADHAP40939 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.7■□□□□ 0.42
HADHAP40939 COX5BP2-201ENST00000392354 334 ntBASIC17.7■□□□□ 0.42
HADHAP40939 ATP5G2P1-201ENST00000433580 426 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms