Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.56■■□□□ 1.04
TM4SF1P30408 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.56■■□□□ 1.04
TM4SF1P30408 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.56■■□□□ 1.04
TM4SF1P30408 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TM4SF1P30408 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.56■■□□□ 1.04
TM4SF1P30408 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.56■■□□□ 1.04
TM4SF1P30408 RARRES2P8-201ENST00000566335 367 ntBASIC21.56■■□□□ 1.04
TM4SF1P30408 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.56■■□□□ 1.04
TM4SF1P30408 MIR4515-201ENST00000584082 81 ntBASIC21.56■■□□□ 1.04
TM4SF1P30408 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF1P30408 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TM4SF1P30408 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.56■■□□□ 1.04
TM4SF1P30408 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.56■■□□□ 1.04
TM4SF1P30408 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TM4SF1P30408 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF1P30408 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TM4SF1P30408 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.55■■□□□ 1.04
TM4SF1P30408 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.55■■□□□ 1.04
TM4SF1P30408 AC107890.1-201ENST00000422478 521 ntBASIC21.55■■□□□ 1.04
TM4SF1P30408 FAM207CP-201ENST00000443486 507 ntBASIC21.55■■□□□ 1.04
TM4SF1P30408 GAPDHP21-201ENST00000450301 1010 ntBASIC21.55■■□□□ 1.04
TM4SF1P30408 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF1P30408 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF1P30408 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 AC140878.1-201ENST00000565277 250 ntBASIC21.55■■□□□ 1.04
TM4SF1P30408 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.55■■□□□ 1.04
TM4SF1P30408 LINC02560-201ENST00000596379 459 ntBASIC21.55■■□□□ 1.04
TM4SF1P30408 AC008761.3-201ENST00000624803 892 ntBASIC21.55■■□□□ 1.04
TM4SF1P30408 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
TM4SF1P30408 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 AC008677.1-201ENST00000519230 1561 ntBASIC21.55■■□□□ 1.04
TM4SF1P30408 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF1P30408 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TM4SF1P30408 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TM4SF1P30408 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.55■■□□□ 1.04
TM4SF1P30408 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
TM4SF1P30408 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF1P30408 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TM4SF1P30408 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.54■■□□□ 1.04
TM4SF1P30408 GK-202ENST00000378941 458 ntTSL 3 BASIC21.54■■□□□ 1.04
TM4SF1P30408 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TM4SF1P30408 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.54■■□□□ 1.04
TM4SF1P30408 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TM4SF1P30408 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.54■■□□□ 1.04
TM4SF1P30408 AC026150.2-201ENST00000564693 1156 ntBASIC21.54■■□□□ 1.04
TM4SF1P30408 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.54■■□□□ 1.04
TM4SF1P30408 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.54■■□□□ 1.04
TM4SF1P30408 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TM4SF1P30408 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.54■■□□□ 1.04
TM4SF1P30408 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF1P30408 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.54■■□□□ 1.04
TM4SF1P30408 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF1P30408 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF1P30408 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.53■■□□□ 1.04
TM4SF1P30408 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF1P30408 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TM4SF1P30408 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF1P30408 HMGA1P7-201ENST00000406908 502 ntBASIC21.53■■□□□ 1.04
TM4SF1P30408 TREML5P-201ENST00000421694 576 ntBASIC21.53■■□□□ 1.04
TM4SF1P30408 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.53■■□□□ 1.04
TM4SF1P30408 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.53■■□□□ 1.04
TM4SF1P30408 SLC25A39P2-201ENST00000537614 270 ntBASIC21.53■■□□□ 1.04
TM4SF1P30408 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TM4SF1P30408 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
TM4SF1P30408 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.53■■□□□ 1.04
TM4SF1P30408 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
TM4SF1P30408 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
TM4SF1P30408 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF1P30408 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF1P30408 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TM4SF1P30408 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TM4SF1P30408 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TM4SF1P30408 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TM4SF1P30408 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms