Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PTPN3P26045 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN3P26045 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN3P26045 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN3P26045 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTPN3P26045 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.84■□□□□ 0.45
PTPN3P26045 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PTPN3P26045 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PTPN3P26045 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN3P26045 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPN3P26045 AC012615.1-201ENST00000565797 1299 ntBASIC17.84■□□□□ 0.45
PTPN3P26045 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.84■□□□□ 0.45
PTPN3P26045 AD001527.2-201ENST00000622994 785 ntBASIC17.84■□□□□ 0.45
PTPN3P26045 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PTPN3P26045 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTPN3P26045 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN3P26045 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 AC046185.3-201ENST00000623228 1824 ntBASIC17.84■□□□□ 0.45
PTPN3P26045 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN3P26045 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN3P26045 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN3P26045 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN3P26045 AC116353.5-201ENST00000638148 1699 ntBASIC17.83■□□□□ 0.45
PTPN3P26045 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN3P26045 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN3P26045 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN3P26045 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN3P26045 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN3P26045 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.83■□□□□ 0.45
PTPN3P26045 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.83■□□□□ 0.45
PTPN3P26045 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.83■□□□□ 0.45
PTPN3P26045 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.83■□□□□ 0.45
PTPN3P26045 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN3P26045 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.83■□□□□ 0.44
PTPN3P26045 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN3P26045 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN3P26045 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN3P26045 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PTPN3P26045 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.83■□□□□ 0.44
PTPN3P26045 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.83■□□□□ 0.44
PTPN3P26045 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PTPN3P26045 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.83■□□□□ 0.44
PTPN3P26045 AC114341.1-201ENST00000618070 349 ntBASIC17.83■□□□□ 0.44
PTPN3P26045 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN3P26045 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN3P26045 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN3P26045 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN3P26045 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN3P26045 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN3P26045 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTPN3P26045 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTPN3P26045 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN3P26045 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN3P26045 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PTPN3P26045 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
PTPN3P26045 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTPN3P26045 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN3P26045 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN3P26045 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN3P26045 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN3P26045 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN3P26045 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTPN3P26045 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN3P26045 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTPN3P26045 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTPN3P26045 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 AC132938.5-201ENST00000624980 1813 ntBASIC17.82■□□□□ 0.44
PTPN3P26045 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN3P26045 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms