Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RFX1P22670 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
RFX1P22670 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX1P22670 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
RFX1P22670 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX1P22670 MINOS1P3-201ENST00000457048 203 ntBASIC19.07■□□□□ 0.64
RFX1P22670 KRT18P58-201ENST00000527480 1120 ntBASIC19.07■□□□□ 0.64
RFX1P22670 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX1P22670 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX1P22670 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX1P22670 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.06■□□□□ 0.64
RFX1P22670 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX1P22670 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.06■□□□□ 0.64
RFX1P22670 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RFX1P22670 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RFX1P22670 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.06■□□□□ 0.64
RFX1P22670 AC002558.1-201ENST00000488906 803 ntBASIC19.06■□□□□ 0.64
RFX1P22670 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX1P22670 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
RFX1P22670 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX1P22670 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RFX1P22670 AL671883.3-201ENST00000603274 991 ntBASIC19.06■□□□□ 0.64
RFX1P22670 AC124864.1-201ENST00000623408 392 ntBASIC19.06■□□□□ 0.64
RFX1P22670 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX1P22670 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX1P22670 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.06■□□□□ 0.64
RFX1P22670 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX1P22670 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.06■□□□□ 0.64
RFX1P22670 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.05■□□□□ 0.64
RFX1P22670 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.05■□□□□ 0.64
RFX1P22670 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RFX1P22670 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 MIR574-201ENST00000385209 96 ntBASIC19.05■□□□□ 0.64
RFX1P22670 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 FAM220CP-201ENST00000395253 831 ntBASIC19.05■□□□□ 0.64
RFX1P22670 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.05■□□□□ 0.64
RFX1P22670 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RFX1P22670 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 AC108860.2-201ENST00000562760 2183 ntBASIC19.05■□□□□ 0.64
RFX1P22670 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFX1P22670 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX1P22670 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFX1P22670 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX1P22670 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.04■□□□□ 0.64
RFX1P22670 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX1P22670 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RFX1P22670 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX1P22670 MIR940-201ENST00000401276 94 ntBASIC19.04■□□□□ 0.64
RFX1P22670 AF186996.4-201ENST00000467186 377 ntBASIC19.04■□□□□ 0.64
RFX1P22670 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFX1P22670 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.04■□□□□ 0.64
RFX1P22670 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.04■□□□□ 0.64
RFX1P22670 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.04■□□□□ 0.64
RFX1P22670 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX1P22670 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFX1P22670 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.04■□□□□ 0.64
RFX1P22670 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX1P22670 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX1P22670 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms