Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NFKB1P19838 AP001094.4-201ENST00000579008 2176 ntBASIC17.8■□□□□ 0.44
NFKB1P19838 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.8■□□□□ 0.44
NFKB1P19838 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.8■□□□□ 0.44
NFKB1P19838 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.8■□□□□ 0.44
NFKB1P19838 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 RCN1P2-201ENST00000398357 915 ntBASIC17.8■□□□□ 0.44
NFKB1P19838 UPK3BP1-201ENST00000428678 509 ntBASIC17.8■□□□□ 0.44
NFKB1P19838 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
NFKB1P19838 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.8■□□□□ 0.44
NFKB1P19838 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.8■□□□□ 0.44
NFKB1P19838 AC012615.1-201ENST00000565797 1299 ntBASIC17.8■□□□□ 0.44
NFKB1P19838 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.8■□□□□ 0.44
NFKB1P19838 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NFKB1P19838 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NFKB1P19838 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 INTS4P1-201ENST00000438455 1935 ntBASIC17.8■□□□□ 0.44
NFKB1P19838 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 AC016396.2-201ENST00000562575 1417 ntBASIC17.8■□□□□ 0.44
NFKB1P19838 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.8■□□□□ 0.44
NFKB1P19838 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
NFKB1P19838 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.79■□□□□ 0.44
NFKB1P19838 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.79■□□□□ 0.44
NFKB1P19838 AC020916.1-201ENST00000587762 1774 ntBASIC17.79■□□□□ 0.44
NFKB1P19838 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NFKB1P19838 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NFKB1P19838 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NFKB1P19838 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NFKB1P19838 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NFKB1P19838 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.79■□□□□ 0.44
NFKB1P19838 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.79■□□□□ 0.44
NFKB1P19838 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.79■□□□□ 0.44
NFKB1P19838 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.79■□□□□ 0.44
NFKB1P19838 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
NFKB1P19838 STK25P1-201ENST00000585406 838 ntBASIC17.79■□□□□ 0.44
NFKB1P19838 AC099336.1-202ENST00000602961 463 ntBASIC17.79■□□□□ 0.44
NFKB1P19838 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NFKB1P19838 AL353593.2-201ENST00000602529 1483 ntBASIC17.79■□□□□ 0.44
NFKB1P19838 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NFKB1P19838 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NFKB1P19838 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.79■□□□□ 0.44
NFKB1P19838 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFKB1P19838 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKB1P19838 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NFKB1P19838 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 AC046185.3-201ENST00000623228 1824 ntBASIC17.78■□□□□ 0.44
NFKB1P19838 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKB1P19838 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.78■□□□□ 0.44
NFKB1P19838 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.78■□□□□ 0.44
NFKB1P19838 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKB1P19838 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.78■□□□□ 0.44
NFKB1P19838 AC114341.1-201ENST00000618070 349 ntBASIC17.78■□□□□ 0.44
NFKB1P19838 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
NFKB1P19838 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
NFKB1P19838 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.78■□□□□ 0.44
NFKB1P19838 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFKB1P19838 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms