Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.26■□□□□ 0.19
PRKCAP17252 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
PRKCAP17252 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.26■□□□□ 0.19
PRKCAP17252 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
PRKCAP17252 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.26■□□□□ 0.19
PRKCAP17252 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.26■□□□□ 0.19
PRKCAP17252 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRKCAP17252 KRT8P47-201ENST00000604727 1398 ntBASIC16.26■□□□□ 0.19
PRKCAP17252 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.25■□□□□ 0.19
PRKCAP17252 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.25■□□□□ 0.19
PRKCAP17252 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.25■□□□□ 0.19
PRKCAP17252 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.25■□□□□ 0.19
PRKCAP17252 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRKCAP17252 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.25■□□□□ 0.19
PRKCAP17252 AC124864.1-201ENST00000623408 392 ntBASIC16.25■□□□□ 0.19
PRKCAP17252 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PRKCAP17252 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PRKCAP17252 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PRKCAP17252 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.25■□□□□ 0.19
PRKCAP17252 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRKCAP17252 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.24■□□□□ 0.19
PRKCAP17252 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PRKCAP17252 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.24■□□□□ 0.19
PRKCAP17252 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 TSSC2-201ENST00000450217 709 ntBASIC16.24■□□□□ 0.19
PRKCAP17252 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.24■□□□□ 0.19
PRKCAP17252 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.24■□□□□ 0.19
PRKCAP17252 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.24■□□□□ 0.19
PRKCAP17252 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
PRKCAP17252 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.24■□□□□ 0.19
PRKCAP17252 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms