Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL3L1P16619 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL3L1P16619 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL3L1P16619 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL3L1P16619 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.46□□□□□ -0.1
CCL3L1P16619 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.46□□□□□ -0.1
CCL3L1P16619 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL3L1P16619 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.45□□□□□ -0.1
CCL3L1P16619 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL3L1P16619 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL3L1P16619 AP001269.4-201ENST00000609611 512 ntBASIC14.45□□□□□ -0.1
CCL3L1P16619 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL3L1P16619 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL3L1P16619 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCL3L1P16619 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 LYSMD4-203ENST00000378904 2122 ntBASIC14.45□□□□□ -0.1
CCL3L1P16619 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.45□□□□□ -0.1
CCL3L1P16619 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL3L1P16619 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL3L1P16619 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 AL353593.2-201ENST00000602529 1483 ntBASIC14.44□□□□□ -0.1
CCL3L1P16619 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL3L1P16619 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 ABCD1P5-201ENST00000445663 754 ntBASIC14.44□□□□□ -0.1
CCL3L1P16619 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 UNC93B7-201ENST00000509439 705 ntBASIC14.44□□□□□ -0.1
CCL3L1P16619 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL3L1P16619 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 LINC01711-201ENST00000598340 967 ntBASIC14.44□□□□□ -0.1
CCL3L1P16619 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL3L1P16619 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 AD001527.2-201ENST00000622994 785 ntBASIC14.44□□□□□ -0.1
CCL3L1P16619 AC073592.5-201ENST00000624854 528 ntBASIC14.44□□□□□ -0.1
CCL3L1P16619 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL3L1P16619 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL3L1P16619 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCL3L1P16619 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCL3L1P16619 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms