Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.27□□□□□ -0.12
DEFA4P12838 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
DEFA4P12838 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
DEFA4P12838 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.27□□□□□ -0.12
DEFA4P12838 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.27□□□□□ -0.12
DEFA4P12838 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEFA4P12838 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
DEFA4P12838 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DEFA4P12838 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.27□□□□□ -0.13
DEFA4P12838 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.27□□□□□ -0.13
DEFA4P12838 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.27□□□□□ -0.13
DEFA4P12838 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DEFA4P12838 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEFA4P12838 COX11P1-201ENST00000489116 835 ntBASIC14.27□□□□□ -0.13
DEFA4P12838 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.27□□□□□ -0.13
DEFA4P12838 GCSHP2-201ENST00000560971 527 ntBASIC14.27□□□□□ -0.13
DEFA4P12838 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.27□□□□□ -0.13
DEFA4P12838 AL023973.1-201ENST00000624619 620 ntBASIC14.27□□□□□ -0.13
DEFA4P12838 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEFA4P12838 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.27□□□□□ -0.13
DEFA4P12838 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEFA4P12838 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
DEFA4P12838 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DEFA4P12838 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.27□□□□□ -0.13
DEFA4P12838 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
DEFA4P12838 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.27□□□□□ -0.13
DEFA4P12838 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.27□□□□□ -0.13
DEFA4P12838 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.27□□□□□ -0.13
DEFA4P12838 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEFA4P12838 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.26□□□□□ -0.13
DEFA4P12838 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.26□□□□□ -0.13
DEFA4P12838 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DEFA4P12838 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
DEFA4P12838 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.26□□□□□ -0.13
DEFA4P12838 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.26□□□□□ -0.13
DEFA4P12838 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.26□□□□□ -0.13
DEFA4P12838 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DEFA4P12838 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.26□□□□□ -0.13
DEFA4P12838 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
DEFA4P12838 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DEFA4P12838 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
DEFA4P12838 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
DEFA4P12838 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 AC079328.2-201ENST00000561241 3354 ntBASIC14.25□□□□□ -0.13
DEFA4P12838 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
DEFA4P12838 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
DEFA4P12838 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms