Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT3P12035 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT3P12035 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT3P12035 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT3P12035 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT3P12035 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
KRT3P12035 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KRT3P12035 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
KRT3P12035 IGHV3-47-201ENST00000425060 335 ntBASIC18.46■□□□□ 0.55
KRT3P12035 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT3P12035 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT3P12035 AC011467.2-201ENST00000598425 242 ntBASIC18.46■□□□□ 0.55
KRT3P12035 AC092119.3-201ENST00000612618 583 ntBASIC18.46■□□□□ 0.55
KRT3P12035 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.46■□□□□ 0.55
KRT3P12035 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT3P12035 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KRT3P12035 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT3P12035 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KRT3P12035 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT3P12035 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT3P12035 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT3P12035 AL049757.1-201ENST00000616842 1596 ntBASIC18.46■□□□□ 0.55
KRT3P12035 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KRT3P12035 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT3P12035 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT3P12035 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 MYCLP1-201ENST00000372451 1075 ntBASIC18.45■□□□□ 0.54
KRT3P12035 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.45■□□□□ 0.54
KRT3P12035 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
KRT3P12035 AP000867.3-201ENST00000524675 377 ntBASIC18.45■□□□□ 0.54
KRT3P12035 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.45■□□□□ 0.54
KRT3P12035 AC074051.2-201ENST00000565115 352 ntBASIC18.45■□□□□ 0.54
KRT3P12035 AC092329.2-201ENST00000598402 547 ntBASIC18.45■□□□□ 0.54
KRT3P12035 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT3P12035 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT3P12035 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KRT3P12035 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KRT3P12035 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT3P12035 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KRT3P12035 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
KRT3P12035 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT3P12035 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT3P12035 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT3P12035 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
KRT3P12035 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT3P12035 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT3P12035 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
KRT3P12035 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT3P12035 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT3P12035 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 AC093458.2-201ENST00000623150 629 ntBASIC18.44■□□□□ 0.54
KRT3P12035 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT3P12035 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT3P12035 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT3P12035 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT3P12035 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
KRT3P12035 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT3P12035 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT3P12035 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT3P12035 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT3P12035 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT3P12035 KRT8P10-201ENST00000450021 1447 ntBASIC18.43■□□□□ 0.54
KRT3P12035 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.43■□□□□ 0.54
KRT3P12035 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
KRT3P12035 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms