Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.23■□□□□ 0.19
UBL4AP11441 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.23■□□□□ 0.19
UBL4AP11441 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBL4AP11441 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBL4AP11441 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.23■□□□□ 0.19
UBL4AP11441 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 REXO1L11P-201ENST00000620964 1927 ntBASIC16.23■□□□□ 0.19
UBL4AP11441 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
UBL4AP11441 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.23■□□□□ 0.19
UBL4AP11441 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBL4AP11441 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.23■□□□□ 0.19
UBL4AP11441 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.23■□□□□ 0.19
UBL4AP11441 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBL4AP11441 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.22■□□□□ 0.19
UBL4AP11441 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.22■□□□□ 0.19
UBL4AP11441 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.22■□□□□ 0.19
UBL4AP11441 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UBL4AP11441 AC069148.1-201ENST00000608741 768 ntBASIC16.22■□□□□ 0.19
UBL4AP11441 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.22■□□□□ 0.19
UBL4AP11441 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.22■□□□□ 0.19
UBL4AP11441 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.22■□□□□ 0.19
UBL4AP11441 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
UBL4AP11441 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UBL4AP11441 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBL4AP11441 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.21■□□□□ 0.19
UBL4AP11441 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 AC125634.1-201ENST00000438758 1403 ntBASIC16.21■□□□□ 0.19
UBL4AP11441 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.21■□□□□ 0.19
UBL4AP11441 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
UBL4AP11441 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 AC005336.2-201ENST00000593183 939 ntBASIC16.21■□□□□ 0.19
UBL4AP11441 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UBL4AP11441 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UBL4AP11441 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.21■□□□□ 0.19
UBL4AP11441 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.21■□□□□ 0.19
UBL4AP11441 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
UBL4AP11441 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBL4AP11441 AC010460.3-201ENST00000511359 1579 ntBASIC16.21■□□□□ 0.18
UBL4AP11441 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBL4AP11441 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.21■□□□□ 0.18
UBL4AP11441 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBL4AP11441 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.21■□□□□ 0.18
UBL4AP11441 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
UBL4AP11441 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.2■□□□□ 0.18
UBL4AP11441 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
UBL4AP11441 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBL4AP11441 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.2■□□□□ 0.18
UBL4AP11441 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.2■□□□□ 0.18
UBL4AP11441 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.2■□□□□ 0.18
UBL4AP11441 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBL4AP11441 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms