Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THRAP10827 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THRAP10827 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.59■□□□□ 0.41
THRAP10827 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.59■□□□□ 0.41
THRAP10827 FDX1P1-201ENST00000449115 551 ntBASIC17.59■□□□□ 0.41
THRAP10827 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.59■□□□□ 0.41
THRAP10827 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.59■□□□□ 0.41
THRAP10827 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.59■□□□□ 0.41
THRAP10827 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 AC124864.1-201ENST00000623408 392 ntBASIC17.59■□□□□ 0.41
THRAP10827 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
THRAP10827 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
THRAP10827 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
THRAP10827 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.58■□□□□ 0.41
THRAP10827 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 AL121761.2-201ENST00000598007 1648 ntBASIC17.58■□□□□ 0.41
THRAP10827 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
THRAP10827 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THRAP10827 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
THRAP10827 EMBP1-201ENST00000458200 901 ntBASIC17.58■□□□□ 0.4
THRAP10827 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.58■□□□□ 0.4
THRAP10827 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.58■□□□□ 0.4
THRAP10827 LINC01711-201ENST00000598340 967 ntBASIC17.58■□□□□ 0.4
THRAP10827 AC138894.3-201ENST00000603787 634 ntBASIC17.58■□□□□ 0.4
THRAP10827 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.58■□□□□ 0.4
THRAP10827 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.58■□□□□ 0.4
THRAP10827 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THRAP10827 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
THRAP10827 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
THRAP10827 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.58■□□□□ 0.4
THRAP10827 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 KRT8P10-201ENST00000450021 1447 ntBASIC17.57■□□□□ 0.4
THRAP10827 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
THRAP10827 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 MIR149-201ENST00000384879 89 ntBASIC17.57■□□□□ 0.4
THRAP10827 IGHV3-47-201ENST00000425060 335 ntBASIC17.57■□□□□ 0.4
THRAP10827 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.57■□□□□ 0.4
THRAP10827 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.57■□□□□ 0.4
THRAP10827 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.57■□□□□ 0.4
THRAP10827 VENTXP7-201ENST00000475503 772 ntBASIC17.57■□□□□ 0.4
THRAP10827 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.57■□□□□ 0.4
THRAP10827 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.57■□□□□ 0.4
THRAP10827 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
THRAP10827 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THRAP10827 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
THRAP10827 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms