Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.13■□□□□ 0.49
CD48P09326 IGHV3-52-201ENST00000519770 353 ntBASIC18.13■□□□□ 0.49
CD48P09326 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.13■□□□□ 0.49
CD48P09326 AC074051.2-201ENST00000565115 352 ntBASIC18.13■□□□□ 0.49
CD48P09326 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.13■□□□□ 0.49
CD48P09326 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD48P09326 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD48P09326 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CD48P09326 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD48P09326 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CD48P09326 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.13■□□□□ 0.49
CD48P09326 BCL2-203ENST00000589955 5011 ntBASIC18.13■□□□□ 0.49
CD48P09326 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.13■□□□□ 0.49
CD48P09326 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD48P09326 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.12■□□□□ 0.49
CD48P09326 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.12■□□□□ 0.49
CD48P09326 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CD48P09326 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CD48P09326 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CD48P09326 RCN1P2-201ENST00000398357 915 ntBASIC18.12■□□□□ 0.49
CD48P09326 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.12■□□□□ 0.49
CD48P09326 MINOS1P3-201ENST00000457048 203 ntBASIC18.12■□□□□ 0.49
CD48P09326 AC096582.2-201ENST00000510860 516 ntBASIC18.12■□□□□ 0.49
CD48P09326 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.12■□□□□ 0.49
CD48P09326 AP000867.3-201ENST00000524675 377 ntBASIC18.12■□□□□ 0.49
CD48P09326 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.12■□□□□ 0.49
CD48P09326 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.12■□□□□ 0.49
CD48P09326 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CD48P09326 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 AD000864.1-201ENST00000624076 2295 ntBASIC18.12■□□□□ 0.49
CD48P09326 AL353593.2-201ENST00000602529 1483 ntBASIC18.12■□□□□ 0.49
CD48P09326 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CD48P09326 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CD48P09326 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 AC046185.3-201ENST00000623228 1824 ntBASIC18.12■□□□□ 0.49
CD48P09326 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD48P09326 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CD48P09326 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CD48P09326 AC103564.2-201ENST00000432853 1299 ntBASIC18.11■□□□□ 0.49
CD48P09326 ATP5G2P1-201ENST00000433580 426 ntBASIC18.11■□□□□ 0.49
CD48P09326 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.11■□□□□ 0.49
CD48P09326 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.11■□□□□ 0.49
CD48P09326 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 STK25P1-201ENST00000585406 838 ntBASIC18.11■□□□□ 0.49
CD48P09326 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.11■□□□□ 0.49
CD48P09326 AC091076.1-201ENST00000610741 619 ntBASIC18.11■□□□□ 0.49
CD48P09326 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CD48P09326 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CD48P09326 AC093458.2-201ENST00000623150 629 ntBASIC18.11■□□□□ 0.49
CD48P09326 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.11■□□□□ 0.49
CD48P09326 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 AC132938.5-201ENST00000624980 1813 ntBASIC18.11■□□□□ 0.49
CD48P09326 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 INTS4P1-201ENST00000438455 1935 ntBASIC18.11■□□□□ 0.49
CD48P09326 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.11■□□□□ 0.49
CD48P09326 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 AC060834.1-201ENST00000443027 2032 ntBASIC18.11■□□□□ 0.49
CD48P09326 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD48P09326 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CD48P09326 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CD48P09326 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.1■□□□□ 0.49
CD48P09326 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CD48P09326 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.1■□□□□ 0.49
CD48P09326 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CD48P09326 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.1■□□□□ 0.49
CD48P09326 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.1■□□□□ 0.49
CD48P09326 MYCLP1-201ENST00000372451 1075 ntBASIC18.1■□□□□ 0.49
CD48P09326 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CD48P09326 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms