Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 LINC01311-201ENST00000565162 1445 ntBASIC15.26■□□□□ 0.03
SFTPBP07988 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.25■□□□□ 0.03
SFTPBP07988 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.25■□□□□ 0.03
SFTPBP07988 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SFTPBP07988 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SFTPBP07988 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 AC022898.2-201ENST00000616822 1312 ntBASIC15.25■□□□□ 0.03
SFTPBP07988 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.25■□□□□ 0.03
SFTPBP07988 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.25■□□□□ 0.03
SFTPBP07988 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.25■□□□□ 0.03
SFTPBP07988 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 AC092597.1-201ENST00000487352 616 ntBASIC15.25■□□□□ 0.03
SFTPBP07988 FAM86EP-206ENST00000510506 987 ntBASIC15.25■□□□□ 0.03
SFTPBP07988 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.25■□□□□ 0.03
SFTPBP07988 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.25■□□□□ 0.03
SFTPBP07988 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.25■□□□□ 0.03
SFTPBP07988 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SFTPBP07988 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SFTPBP07988 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.25■□□□□ 0.03
SFTPBP07988 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SFTPBP07988 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SFTPBP07988 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.24■□□□□ 0.03
SFTPBP07988 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SFTPBP07988 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.24■□□□□ 0.03
SFTPBP07988 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.24■□□□□ 0.03
SFTPBP07988 PCED1CP-201ENST00000419887 785 ntBASIC15.24■□□□□ 0.03
SFTPBP07988 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SFTPBP07988 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.24■□□□□ 0.03
SFTPBP07988 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.24■□□□□ 0.03
SFTPBP07988 VENTXP5-201ENST00000523979 775 ntBASIC15.24■□□□□ 0.03
SFTPBP07988 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.24■□□□□ 0.03
SFTPBP07988 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 AC091076.1-201ENST00000610741 619 ntBASIC15.24■□□□□ 0.03
SFTPBP07988 HYMAI.1-201ENST00000620949 238 ntBASIC15.24■□□□□ 0.03
SFTPBP07988 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.24■□□□□ 0.03
SFTPBP07988 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SFTPBP07988 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SFTPBP07988 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SFTPBP07988 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SFTPBP07988 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms