Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM3P06753 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TPM3P06753 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.65■□□□□ 0.74
TPM3P06753 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM3P06753 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TPM3P06753 CD99P1-205ENST00000527459 561 ntBASIC19.65■□□□□ 0.74
TPM3P06753 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM3P06753 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.65■□□□□ 0.74
TPM3P06753 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM3P06753 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
TPM3P06753 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM3P06753 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM3P06753 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TPM3P06753 AL513477.1-201ENST00000602865 2407 ntBASIC19.65■□□□□ 0.74
TPM3P06753 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TPM3P06753 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TPM3P06753 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM3P06753 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 AC022188.1-201ENST00000620960 1664 ntBASIC19.65■□□□□ 0.74
TPM3P06753 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM3P06753 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.65■□□□□ 0.74
TPM3P06753 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM3P06753 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
TPM3P06753 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPM3P06753 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TPM3P06753 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.64■□□□□ 0.74
TPM3P06753 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPM3P06753 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM3P06753 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.64■□□□□ 0.73
TPM3P06753 RPS2P55-201ENST00000397318 883 ntBASIC19.64■□□□□ 0.73
TPM3P06753 AC012618.2-201ENST00000428058 849 ntBASIC19.64■□□□□ 0.73
TPM3P06753 DDX43P3-201ENST00000441064 443 ntBASIC19.64■□□□□ 0.73
TPM3P06753 AC107956.1-201ENST00000494359 873 ntBASIC19.64■□□□□ 0.73
TPM3P06753 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.64■□□□□ 0.73
TPM3P06753 AC116562.4-202ENST00000641738 218 ntBASIC19.64■□□□□ 0.73
TPM3P06753 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TPM3P06753 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 AC092338.2-201ENST00000568827 1415 ntBASIC19.64■□□□□ 0.73
TPM3P06753 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM3P06753 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM3P06753 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TPM3P06753 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM3P06753 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TPM3P06753 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.64■□□□□ 0.73
TPM3P06753 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TPM3P06753 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
TPM3P06753 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM3P06753 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
TPM3P06753 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 CYP2T1P-202ENST00000641596 2535 ntBASIC19.63■□□□□ 0.73
TPM3P06753 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TPM3P06753 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM3P06753 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.63■□□□□ 0.73
TPM3P06753 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TPM3P06753 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM3P06753 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 KRT18P29-201ENST00000397031 1267 ntBASIC19.63■□□□□ 0.73
TPM3P06753 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.63■□□□□ 0.73
TPM3P06753 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM3P06753 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.63■□□□□ 0.73
TPM3P06753 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM3P06753 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.63■□□□□ 0.73
TPM3P06753 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM3P06753 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM3P06753 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.63■□□□□ 0.73
TPM3P06753 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms