Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 AC092053.1-201ENST00000605787 1936 ntBASIC14.88□□□□□ -0.03
CD3DP04234 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 AL662844.4-201ENST00000606367 2838 ntBASIC14.88□□□□□ -0.03
CD3DP04234 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 AC092068.3-201ENST00000587894 2016 ntBASIC14.87□□□□□ -0.03
CD3DP04234 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 CRYGFP-201ENST00000418459 633 ntBASIC14.87□□□□□ -0.03
CD3DP04234 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.87□□□□□ -0.03
CD3DP04234 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 AC116562.2-201ENST00000507042 360 ntBASIC14.87□□□□□ -0.03
CD3DP04234 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 AC073648.6-201ENST00000641589 218 ntBASIC14.87□□□□□ -0.03
CD3DP04234 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.87□□□□□ -0.03
CD3DP04234 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CD3DP04234 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD3DP04234 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD3DP04234 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 KRT8P47-201ENST00000604727 1398 ntBASIC14.86□□□□□ -0.03
CD3DP04234 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD3DP04234 KRT18P29-201ENST00000397031 1267 ntBASIC14.86□□□□□ -0.03
CD3DP04234 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.86□□□□□ -0.03
CD3DP04234 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.86□□□□□ -0.03
CD3DP04234 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.86□□□□□ -0.03
CD3DP04234 C1QBPP2-201ENST00000528754 825 ntBASIC14.86□□□□□ -0.03
CD3DP04234 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.86□□□□□ -0.03
CD3DP04234 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD3DP04234 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CD3DP04234 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD3DP04234 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD3DP04234 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD3DP04234 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.85□□□□□ -0.03
CD3DP04234 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD3DP04234 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CD3DP04234 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms