Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.91■□□□□ 0.94
COL1A1P02452 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL1A1P02452 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL1A1P02452 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.91■□□□□ 0.94
COL1A1P02452 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.91■□□□□ 0.94
COL1A1P02452 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
COL1A1P02452 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.91■□□□□ 0.94
COL1A1P02452 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
COL1A1P02452 ACTL9-202ENST00000612068 1252 ntBASIC20.91■□□□□ 0.94
COL1A1P02452 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.91■□□□□ 0.94
COL1A1P02452 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.91■□□□□ 0.94
COL1A1P02452 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A1P02452 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.91■□□□□ 0.94
COL1A1P02452 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 AC133963.1-201ENST00000504166 1679 ntBASIC20.9■□□□□ 0.94
COL1A1P02452 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A1P02452 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A1P02452 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 AC107918.2-201ENST00000530817 355 ntBASIC20.9■□□□□ 0.94
COL1A1P02452 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL1A1P02452 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.9■□□□□ 0.94
COL1A1P02452 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.9■□□□□ 0.94
COL1A1P02452 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A1P02452 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 PI4KAP1-204ENST00000612579 1703 ntBASIC20.9■□□□□ 0.94
COL1A1P02452 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A1P02452 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A1P02452 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
COL1A1P02452 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A1P02452 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.89■□□□□ 0.94
COL1A1P02452 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.89■□□□□ 0.94
COL1A1P02452 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
COL1A1P02452 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.89■□□□□ 0.94
COL1A1P02452 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
COL1A1P02452 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.89■□□□□ 0.94
COL1A1P02452 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.89■□□□□ 0.94
COL1A1P02452 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.89■□□□□ 0.94
COL1A1P02452 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.89■□□□□ 0.94
COL1A1P02452 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
COL1A1P02452 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A1P02452 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A1P02452 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A1P02452 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.89■□□□□ 0.93
COL1A1P02452 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A1P02452 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A1P02452 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.89■□□□□ 0.93
COL1A1P02452 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A1P02452 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.89■□□□□ 0.93
COL1A1P02452 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.89■□□□□ 0.93
COL1A1P02452 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.89■□□□□ 0.93
COL1A1P02452 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.88■□□□□ 0.93
COL1A1P02452 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A1P02452 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.88■□□□□ 0.93
COL1A1P02452 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.88■□□□□ 0.93
COL1A1P02452 AC096734.2-201ENST00000562054 433 ntBASIC20.88■□□□□ 0.93
COL1A1P02452 GGTLC5P-201ENST00000617623 998 ntBASIC20.88■□□□□ 0.93
COL1A1P02452 AC004877.2-201ENST00000623941 599 ntBASIC20.88■□□□□ 0.93
COL1A1P02452 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.88■□□□□ 0.93
COL1A1P02452 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A1P02452 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A1P02452 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A1P02452 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A1P02452 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.88■□□□□ 0.93
COL1A1P02452 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A1P02452 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A1P02452 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A1P02452 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A1P02452 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A1P02452 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.88■□□□□ 0.93
COL1A1P02452 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A1P02452 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A1P02452 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.88■□□□□ 0.93
COL1A1P02452 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms