Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF3O95398 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC25.92■■□□□ 1.74
RAPGEF3O95398 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF3O95398 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF3O95398 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF3O95398 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC25.91■■□□□ 1.74
RAPGEF3O95398 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC25.91■■□□□ 1.74
RAPGEF3O95398 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC25.91■■□□□ 1.74
RAPGEF3O95398 RPS2P32-201ENST00000439199 892 ntBASIC25.91■■□□□ 1.74
RAPGEF3O95398 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC25.91■■□□□ 1.74
RAPGEF3O95398 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC25.91■■□□□ 1.74
RAPGEF3O95398 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 IGHV3-72-202ENST00000621503 303 ntBASIC25.91■■□□□ 1.74
RAPGEF3O95398 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC25.91■■□□□ 1.74
RAPGEF3O95398 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF3O95398 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF3O95398 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF3O95398 AC079776.1-201ENST00000401540 1152 ntBASIC25.9■■□□□ 1.74
RAPGEF3O95398 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF3O95398 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 SPDYE12P-201ENST00000618416 771 ntBASIC25.9■■□□□ 1.74
RAPGEF3O95398 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC25.9■■□□□ 1.74
RAPGEF3O95398 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF3O95398 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RAPGEF3O95398 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RAPGEF3O95398 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC25.89■■□□□ 1.74
RAPGEF3O95398 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RAPGEF3O95398 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RAPGEF3O95398 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC25.89■■□□□ 1.74
RAPGEF3O95398 MIR1909-201ENST00000411312 80 ntBASIC25.89■■□□□ 1.74
RAPGEF3O95398 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC25.89■■□□□ 1.74
RAPGEF3O95398 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RAPGEF3O95398 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RAPGEF3O95398 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RAPGEF3O95398 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC25.89■■□□□ 1.73
RAPGEF3O95398 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
RAPGEF3O95398 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
RAPGEF3O95398 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RAPGEF3O95398 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
RAPGEF3O95398 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.88■■□□□ 1.73
RAPGEF3O95398 AC138969.3-201ENST00000546612 1459 ntBASIC25.88■■□□□ 1.73
RAPGEF3O95398 AC138932.2-201ENST00000548268 1459 ntBASIC25.88■■□□□ 1.73
RAPGEF3O95398 AC126755.4-201ENST00000549796 1459 ntBASIC25.88■■□□□ 1.73
RAPGEF3O95398 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 ENSA-206ENST00000361631 725 ntTSL 2 BASIC25.88■■□□□ 1.73
RAPGEF3O95398 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC25.88■■□□□ 1.73
RAPGEF3O95398 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC25.88■■□□□ 1.73
RAPGEF3O95398 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC25.88■■□□□ 1.73
RAPGEF3O95398 GIMAP3P-201ENST00000495150 836 ntBASIC25.88■■□□□ 1.73
RAPGEF3O95398 AL132655.2-201ENST00000596276 594 ntBASIC25.88■■□□□ 1.73
RAPGEF3O95398 AC084346.2-201ENST00000607097 949 ntBASIC25.88■■□□□ 1.73
RAPGEF3O95398 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC25.88■■□□□ 1.73
RAPGEF3O95398 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF3O95398 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF3O95398 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF3O95398 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF3O95398 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF3O95398 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms