Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.4■□□□□ 0.38
KLHL41O60662 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.4■□□□□ 0.38
KLHL41O60662 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.4■□□□□ 0.38
KLHL41O60662 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KLHL41O60662 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
KLHL41O60662 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.4■□□□□ 0.38
KLHL41O60662 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.4■□□□□ 0.38
KLHL41O60662 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.4■□□□□ 0.38
KLHL41O60662 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.4■□□□□ 0.38
KLHL41O60662 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KLHL41O60662 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
KLHL41O60662 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.4■□□□□ 0.38
KLHL41O60662 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
KLHL41O60662 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KLHL41O60662 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.4■□□□□ 0.38
KLHL41O60662 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KLHL41O60662 HLA-J-201ENST00000462773 1622 ntBASIC17.39■□□□□ 0.38
KLHL41O60662 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KLHL41O60662 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
KLHL41O60662 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KLHL41O60662 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.39■□□□□ 0.38
KLHL41O60662 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KLHL41O60662 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.39■□□□□ 0.37
KLHL41O60662 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KLHL41O60662 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KLHL41O60662 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.39■□□□□ 0.37
KLHL41O60662 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 HBZP1-201ENST00000354915 429 ntBASIC17.39■□□□□ 0.37
KLHL41O60662 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
KLHL41O60662 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.39■□□□□ 0.37
KLHL41O60662 AL645929.1-201ENST00000420084 975 ntBASIC17.39■□□□□ 0.37
KLHL41O60662 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.39■□□□□ 0.37
KLHL41O60662 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.39■□□□□ 0.37
KLHL41O60662 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.39■□□□□ 0.37
KLHL41O60662 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.39■□□□□ 0.37
KLHL41O60662 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.39■□□□□ 0.37
KLHL41O60662 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KLHL41O60662 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KLHL41O60662 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KLHL41O60662 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KLHL41O60662 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
KLHL41O60662 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHL41O60662 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
KLHL41O60662 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.38■□□□□ 0.37
KLHL41O60662 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.38■□□□□ 0.37
KLHL41O60662 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL41O60662 AC106886.4-201ENST00000623557 2502 ntBASIC17.38■□□□□ 0.37
KLHL41O60662 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL41O60662 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms