Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.73■□□□□ 0.11
ZIC3O60481 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.73■□□□□ 0.11
ZIC3O60481 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.73■□□□□ 0.11
ZIC3O60481 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.73■□□□□ 0.11
ZIC3O60481 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.73■□□□□ 0.11
ZIC3O60481 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.73■□□□□ 0.11
ZIC3O60481 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.73■□□□□ 0.11
ZIC3O60481 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
ZIC3O60481 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.73■□□□□ 0.11
ZIC3O60481 MIR7706-201ENST00000613747 67 ntBASIC15.73■□□□□ 0.11
ZIC3O60481 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
ZIC3O60481 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.73■□□□□ 0.11
ZIC3O60481 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ZIC3O60481 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ZIC3O60481 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZIC3O60481 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ZIC3O60481 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ZIC3O60481 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ZIC3O60481 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ZIC3O60481 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.72■□□□□ 0.11
ZIC3O60481 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.72■□□□□ 0.11
ZIC3O60481 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.72■□□□□ 0.11
ZIC3O60481 AC093909.1-201ENST00000504731 1122 ntBASIC15.72■□□□□ 0.11
ZIC3O60481 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.72■□□□□ 0.11
ZIC3O60481 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.72■□□□□ 0.11
ZIC3O60481 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.72■□□□□ 0.11
ZIC3O60481 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.72■□□□□ 0.11
ZIC3O60481 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
ZIC3O60481 AC004706.3-202ENST00000621574 984 ntBASIC15.72■□□□□ 0.11
ZIC3O60481 AC116407.3-201ENST00000623905 1129 ntBASIC15.72■□□□□ 0.11
ZIC3O60481 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
ZIC3O60481 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ZIC3O60481 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ZIC3O60481 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 AC243591.1-201ENST00000452967 1364 ntBASIC15.72■□□□□ 0.11
ZIC3O60481 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.72■□□□□ 0.11
ZIC3O60481 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.72■□□□□ 0.11
ZIC3O60481 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ZIC3O60481 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZIC3O60481 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZIC3O60481 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZIC3O60481 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.71■□□□□ 0.11
ZIC3O60481 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.71■□□□□ 0.11
ZIC3O60481 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.71■□□□□ 0.11
ZIC3O60481 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
ZIC3O60481 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 NCF1C-201ENST00000438382 1427 ntBASIC15.71■□□□□ 0.11
ZIC3O60481 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ZIC3O60481 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.71■□□□□ 0.11
ZIC3O60481 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.71■□□□□ 0.11
ZIC3O60481 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.71■□□□□ 0.11
ZIC3O60481 LINC00982-205ENST00000420957 435 ntBASIC15.71■□□□□ 0.11
ZIC3O60481 KRT18P27-201ENST00000427733 1299 ntBASIC15.71■□□□□ 0.11
ZIC3O60481 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.71■□□□□ 0.11
ZIC3O60481 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.71■□□□□ 0.11
ZIC3O60481 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.71■□□□□ 0.11
ZIC3O60481 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.71■□□□□ 0.11
ZIC3O60481 AC105339.3-201ENST00000560043 636 ntBASIC15.71■□□□□ 0.11
ZIC3O60481 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.71■□□□□ 0.11
ZIC3O60481 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ZIC3O60481 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.71■□□□□ 0.11
ZIC3O60481 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.71■□□□□ 0.11
ZIC3O60481 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ZIC3O60481 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZIC3O60481 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.71■□□□□ 0.1
ZIC3O60481 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZIC3O60481 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZIC3O60481 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZIC3O60481 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms