Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 AC027796.2-201ENST00000575326 344 ntBASIC17.36■□□□□ 0.37
PCDHGA12O60330 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 AC073592.3-201ENST00000625118 1834 ntBASIC17.35■□□□□ 0.37
PCDHGA12O60330 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 AC136632.2-201ENST00000512891 861 ntBASIC17.35■□□□□ 0.37
PCDHGA12O60330 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.35■□□□□ 0.37
PCDHGA12O60330 AC064836.3-201ENST00000607928 673 ntBASIC17.35■□□□□ 0.37
PCDHGA12O60330 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA12O60330 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA12O60330 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 AC023274.1-201ENST00000418278 595 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 AC103564.2-201ENST00000432853 1299 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 AP006288.1-201ENST00000446065 395 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 DNAJB3-202ENST00000449667 1266 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 GMCL1P1-201ENST00000463439 1581 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 AC108751.1-201ENST00000490852 363 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 AC126763.1-201ENST00000552015 2118 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 AC008764.6-201ENST00000595909 2069 ntBASIC17.34■□□□□ 0.37
PCDHGA12O60330 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA12O60330 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA12O60330 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PCDHGA12O60330 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGA12O60330 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms