Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 RPS2P1-201ENST00000434010 821 ntBASIC17.16■□□□□ 0.34
VEGFDO43915 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.16■□□□□ 0.34
VEGFDO43915 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.16■□□□□ 0.34
VEGFDO43915 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.16■□□□□ 0.34
VEGFDO43915 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.16■□□□□ 0.34
VEGFDO43915 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 HLA-A-201ENST00000376802 1334 ntBASIC17.16■□□□□ 0.34
VEGFDO43915 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.16■□□□□ 0.34
VEGFDO43915 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VEGFDO43915 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VEGFDO43915 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.16■□□□□ 0.34
VEGFDO43915 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.16■□□□□ 0.34
VEGFDO43915 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.16■□□□□ 0.34
VEGFDO43915 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.15■□□□□ 0.34
VEGFDO43915 HNRNPDP1-201ENST00000439535 754 ntBASIC17.15■□□□□ 0.34
VEGFDO43915 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.15■□□□□ 0.34
VEGFDO43915 RNA5SP419-201ENST00000515908 135 ntBASIC17.15■□□□□ 0.34
VEGFDO43915 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VEGFDO43915 AC006557.2-201ENST00000592985 1240 ntBASIC17.15■□□□□ 0.34
VEGFDO43915 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.15■□□□□ 0.34
VEGFDO43915 FAM215A-202ENST00000632077 792 ntBASIC17.15■□□□□ 0.34
VEGFDO43915 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VEGFDO43915 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VEGFDO43915 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
VEGFDO43915 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VEGFDO43915 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
VEGFDO43915 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.14■□□□□ 0.33
VEGFDO43915 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VEGFDO43915 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.14■□□□□ 0.33
VEGFDO43915 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.14■□□□□ 0.33
VEGFDO43915 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 ACTG1P4-201ENST00000425123 1122 ntBASIC17.14■□□□□ 0.33
VEGFDO43915 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.14■□□□□ 0.33
VEGFDO43915 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.14■□□□□ 0.33
VEGFDO43915 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.14■□□□□ 0.33
VEGFDO43915 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.14■□□□□ 0.33
VEGFDO43915 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.14■□□□□ 0.33
VEGFDO43915 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
VEGFDO43915 AC008735.5-201ENST00000623544 497 ntBASIC17.14■□□□□ 0.33
VEGFDO43915 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.14■□□□□ 0.33
VEGFDO43915 AC097637.2-201ENST00000624096 1997 ntBASIC17.14■□□□□ 0.33
VEGFDO43915 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VEGFDO43915 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VEGFDO43915 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.14■□□□□ 0.33
VEGFDO43915 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VEGFDO43915 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VEGFDO43915 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VEGFDO43915 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.14■□□□□ 0.33
VEGFDO43915 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.13■□□□□ 0.33
VEGFDO43915 AL135999.2-201ENST00000622438 1686 ntBASIC17.13■□□□□ 0.33
VEGFDO43915 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VEGFDO43915 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VEGFDO43915 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VEGFDO43915 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.13■□□□□ 0.33
VEGFDO43915 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms