Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.76■□□□□ 0.43
HOXC11O43248 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC11O43248 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HOXC11O43248 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXC11O43248 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
HOXC11O43248 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC11O43248 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 AL135999.2-201ENST00000622438 1686 ntBASIC17.75■□□□□ 0.43
HOXC11O43248 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HOXC11O43248 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXC11O43248 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC11O43248 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.75■□□□□ 0.43
HOXC11O43248 AC096734.2-201ENST00000562054 433 ntBASIC17.75■□□□□ 0.43
HOXC11O43248 AC092865.6-201ENST00000642101 219 ntBASIC17.75■□□□□ 0.43
HOXC11O43248 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC11O43248 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HOXC11O43248 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXC11O43248 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HOXC11O43248 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC11O43248 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.75■□□□□ 0.43
HOXC11O43248 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HOXC11O43248 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
HOXC11O43248 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HOXC11O43248 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HOXC11O43248 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HOXC11O43248 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HOXC11O43248 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC11O43248 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXC11O43248 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC11O43248 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXC11O43248 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
HOXC11O43248 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HOXC11O43248 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXC11O43248 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC11O43248 AP001160.2-201ENST00000596071 487 ntBASIC17.74■□□□□ 0.43
HOXC11O43248 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC11O43248 AC134684.3-201ENST00000641758 218 ntBASIC17.74■□□□□ 0.43
HOXC11O43248 AC079781.4-201ENST00000641908 219 ntBASIC17.74■□□□□ 0.43
HOXC11O43248 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC11O43248 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC11O43248 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC11O43248 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC11O43248 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC11O43248 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HOXC11O43248 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC11O43248 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC11O43248 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HOXC11O43248 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC11O43248 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HOXC11O43248 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HOXC11O43248 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HOXC11O43248 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC11O43248 YBX1P5-201ENST00000509441 847 ntBASIC17.73■□□□□ 0.43
HOXC11O43248 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC11O43248 AL513190.1-201ENST00000621254 727 ntBASIC17.73■□□□□ 0.43
HOXC11O43248 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 AC010507.1-201ENST00000633895 436 ntBASIC17.73■□□□□ 0.43
HOXC11O43248 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC11O43248 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HOXC11O43248 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms