Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD2O14647 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD2O14647 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC24.04■■□□□ 1.44
CHD2O14647 IGHV3-72-202ENST00000621503 303 ntBASIC24.04■■□□□ 1.44
CHD2O14647 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD2O14647 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CHD2O14647 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC24.04■■□□□ 1.44
CHD2O14647 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD2O14647 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD2O14647 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CHD2O14647 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC24.03■■□□□ 1.44
CHD2O14647 IGHV3-71-201ENST00000523324 359 ntBASIC24.03■■□□□ 1.44
CHD2O14647 AC005412.3-201ENST00000580309 715 ntBASIC24.03■■□□□ 1.44
CHD2O14647 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CHD2O14647 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD2O14647 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CHD2O14647 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD2O14647 AC109635.5-201ENST00000533593 962 ntBASIC24.03■■□□□ 1.44
CHD2O14647 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC24.03■■□□□ 1.44
CHD2O14647 AC073592.8-201ENST00000624126 511 ntBASIC24.03■■□□□ 1.44
CHD2O14647 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHD2O14647 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CHD2O14647 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD2O14647 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC24.02■■□□□ 1.44
CHD2O14647 AC008267.7-201ENST00000624570 1194 ntBASIC24.02■■□□□ 1.44
CHD2O14647 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC24.02■■□□□ 1.44
CHD2O14647 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
CHD2O14647 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHD2O14647 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD2O14647 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC24.02■■□□□ 1.44
CHD2O14647 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD2O14647 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CHD2O14647 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC24.01■■□□□ 1.43
CHD2O14647 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD2O14647 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD2O14647 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CHD2O14647 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC24■■□□□ 1.43
CHD2O14647 IFT20-216ENST00000588477 774 ntTSL 5 BASIC24■■□□□ 1.43
CHD2O14647 SPDYE12P-201ENST00000618416 771 ntBASIC24■■□□□ 1.43
CHD2O14647 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC24■■□□□ 1.43
CHD2O14647 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD2O14647 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CHD2O14647 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CHD2O14647 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC24■■□□□ 1.43
CHD2O14647 SPTLC1P1-201ENST00000447199 261 ntBASIC24■■□□□ 1.43
CHD2O14647 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC24■■□□□ 1.43
CHD2O14647 MIR4453-201ENST00000584019 89 ntBASIC24■■□□□ 1.43
CHD2O14647 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24■■□□□ 1.43
CHD2O14647 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24■■□□□ 1.43
CHD2O14647 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD2O14647 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CHD2O14647 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC23.99■■□□□ 1.43
CHD2O14647 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
CHD2O14647 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
CHD2O14647 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHD2O14647 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CHD2O14647 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CHD2O14647 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD2O14647 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD2O14647 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC23.99■■□□□ 1.43
CHD2O14647 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHD2O14647 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHD2O14647 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHD2O14647 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD2O14647 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD2O14647 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD2O14647 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD2O14647 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD2O14647 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD2O14647 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD2O14647 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CHD2O14647 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC23.98■■□□□ 1.43
CHD2O14647 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD2O14647 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms