Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN3O00409 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN3O00409 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN3O00409 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 AL353593.2-201ENST00000602529 1483 ntBASIC18.73■□□□□ 0.59
FOXN3O00409 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN3O00409 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
FOXN3O00409 SLC25A1P3-201ENST00000395415 828 ntBASIC18.73■□□□□ 0.59
FOXN3O00409 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 MIR1224-201ENST00000408193 85 ntBASIC18.73■□□□□ 0.59
FOXN3O00409 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 STK25P1-201ENST00000585406 838 ntBASIC18.73■□□□□ 0.59
FOXN3O00409 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
FOXN3O00409 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 AD000864.1-201ENST00000624076 2295 ntBASIC18.73■□□□□ 0.59
FOXN3O00409 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXN3O00409 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN3O00409 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 AC046185.3-201ENST00000623228 1824 ntBASIC18.72■□□□□ 0.59
FOXN3O00409 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN3O00409 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN3O00409 RCN1P2-201ENST00000398357 915 ntBASIC18.72■□□□□ 0.59
FOXN3O00409 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 MINOS1P3-201ENST00000457048 203 ntBASIC18.72■□□□□ 0.59
FOXN3O00409 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN3O00409 AC111152.3-201ENST00000569699 673 ntBASIC18.72■□□□□ 0.59
FOXN3O00409 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXN3O00409 AC091076.1-201ENST00000610741 619 ntBASIC18.72■□□□□ 0.59
FOXN3O00409 AD001527.2-201ENST00000622994 785 ntBASIC18.72■□□□□ 0.59
FOXN3O00409 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.72■□□□□ 0.59
FOXN3O00409 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN3O00409 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FOXN3O00409 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN3O00409 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN3O00409 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN3O00409 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN3O00409 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
FOXN3O00409 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN3O00409 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
FOXN3O00409 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FOXN3O00409 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN3O00409 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.71■□□□□ 0.59
FOXN3O00409 INTS4P1-201ENST00000438455 1935 ntBASIC18.71■□□□□ 0.59
FOXN3O00409 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
FOXN3O00409 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
FOXN3O00409 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FOXN3O00409 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.71■□□□□ 0.59
FOXN3O00409 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.71■□□□□ 0.59
FOXN3O00409 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN3O00409 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
FOXN3O00409 AC069148.1-201ENST00000608741 768 ntBASIC18.71■□□□□ 0.59
FOXN3O00409 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
FOXN3O00409 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FOXN3O00409 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXN3O00409 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN3O00409 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN3O00409 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms