Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 PCDHA1-201ENST00000378133 2726 ntBASIC18.17■□□□□ 0.5
SRRM3A6NNA2 AL603756.1-201ENST00000606511 2163 ntBASIC18.17■□□□□ 0.5
SRRM3A6NNA2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 AL121912.1-201ENST00000603683 238 ntBASIC18.16■□□□□ 0.5
SRRM3A6NNA2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 AC026691.1-201ENST00000602502 2017 ntBASIC18.16■□□□□ 0.5
SRRM3A6NNA2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.16■□□□□ 0.5
SRRM3A6NNA2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.15■□□□□ 0.5
SRRM3A6NNA2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 AC103702.1-201ENST00000548801 2630 ntBASIC18.15■□□□□ 0.5
SRRM3A6NNA2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM3A6NNA2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRRM3A6NNA2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRRM3A6NNA2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRRM3A6NNA2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms