Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 AC108860.2-201ENST00000562760 2183 ntBASIC16.62■□□□□ 0.25
LRIT2A6NDA9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIT2A6NDA9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 SPDYE21P-201ENST00000413323 827 ntBASIC16.61■□□□□ 0.25
LRIT2A6NDA9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 LINC01711-201ENST00000598340 967 ntBASIC16.61■□□□□ 0.25
LRIT2A6NDA9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 AC073592.4-201ENST00000623827 446 ntBASIC16.61■□□□□ 0.25
LRIT2A6NDA9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 SIGLEC16-201ENST00000599858 1437 ntBASIC16.61■□□□□ 0.25
LRIT2A6NDA9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT2A6NDA9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 AC079776.2-201ENST00000641154 1609 ntBASIC16.6■□□□□ 0.25
LRIT2A6NDA9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms