Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 BNIP3P18-201ENST00000593976 575 ntBASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 AC092329.2-201ENST00000598402 547 ntBASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 KRT8P10-201ENST00000450021 1447 ntBASIC17.52■□□□□ 0.4
CCDC162PA2VCL2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC162PA2VCL2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
CCDC162PA2VCL2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CCDC162PA2VCL2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CCDC162PA2VCL2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC162PA2VCL2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 UPK3BP1-201ENST00000428678 509 ntBASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 AC103564.2-201ENST00000432853 1299 ntBASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 AC096582.2-201ENST00000510860 516 ntBASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 IGHV3-52-201ENST00000519770 353 ntBASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC162PA2VCL2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 OR6D1P-202ENST00000641007 5290 ntBASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 RCN1P2-201ENST00000398357 915 ntBASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms