Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC009053.2-201ENST00000563701 2365 ntBASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 KRT16P4-201ENST00000453883 522 ntBASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 OR6D1P-203ENST00000641209 4860 ntBASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL138688.1-201ENST00000624851 1594 ntBASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 KRT8P10-201ENST00000450021 1447 ntBASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 POM121L3P-201ENST00000419331 1163 ntBASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL353801.3-201ENST00000609898 542 ntBASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC133963.1-201ENST00000504166 1679 ntBASIC14.09□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms