Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC022898.2-201ENST00000616822 1312 ntBASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 SLC25A3P1-201ENST00000443844 931 ntBASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 AL023973.1-201ENST00000624619 620 ntBASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF103-CHMP3A0A140T963 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.89■□□□□ 0.3
RNF103-CHMP3A0A140T963 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RNF103-CHMP3A0A140T963 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF103-CHMP3A0A140T963 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms