Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.23■■□□□ 1.63
KDM4CQ9H3R0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.23■■□□□ 1.63
KDM4CQ9H3R0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KDM4CQ9H3R0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.23■■□□□ 1.63
KDM4CQ9H3R0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.23■■□□□ 1.63
KDM4CQ9H3R0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KDM4CQ9H3R0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KDM4CQ9H3R0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM4CQ9H3R0 NTF6A-201ENST00000591175 560 ntBASIC25.21■■□□□ 1.63
KDM4CQ9H3R0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM4CQ9H3R0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 AC145676.1-201ENST00000514988 2004 ntBASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
KDM4CQ9H3R0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM4CQ9H3R0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM4CQ9H3R0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM4CQ9H3R0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KDM4CQ9H3R0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM4CQ9H3R0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM4CQ9H3R0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM4CQ9H3R0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM4CQ9H3R0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.18■■□□□ 1.62
KDM4CQ9H3R0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
KDM4CQ9H3R0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM4CQ9H3R0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.17■■□□□ 1.62
KDM4CQ9H3R0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KDM4CQ9H3R0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.17■■□□□ 1.62
KDM4CQ9H3R0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.17■■□□□ 1.62
KDM4CQ9H3R0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
KDM4CQ9H3R0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM4CQ9H3R0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KDM4CQ9H3R0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
KDM4CQ9H3R0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.16■■□□□ 1.62
KDM4CQ9H3R0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KDM4CQ9H3R0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.16■■□□□ 1.62
KDM4CQ9H3R0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM4CQ9H3R0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KDM4CQ9H3R0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.14■■□□□ 1.62
KDM4CQ9H3R0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
KDM4CQ9H3R0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.14■■□□□ 1.61
KDM4CQ9H3R0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KDM4CQ9H3R0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
KDM4CQ9H3R0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.12■■□□□ 1.61
KDM4CQ9H3R0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.12■■□□□ 1.61
KDM4CQ9H3R0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.12■■□□□ 1.61
KDM4CQ9H3R0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KDM4CQ9H3R0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KDM4CQ9H3R0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KDM4CQ9H3R0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KDM4CQ9H3R0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.11■■□□□ 1.61
KDM4CQ9H3R0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KDM4CQ9H3R0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KDM4CQ9H3R0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 AP002414.2-202ENST00000590929 1450 ntBASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
KDM4CQ9H3R0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM4CQ9H3R0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 AC012354.3-201ENST00000623734 483 ntBASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
KDM4CQ9H3R0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
KDM4CQ9H3R0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
KDM4CQ9H3R0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM4CQ9H3R0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM4CQ9H3R0 AL157400.5-201ENST00000507624 621 ntBASIC25.07■■□□□ 1.6
KDM4CQ9H3R0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
KDM4CQ9H3R0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM4CQ9H3R0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM4CQ9H3R0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM4CQ9H3R0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.06■■□□□ 1.6
KDM4CQ9H3R0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
KDM4CQ9H3R0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM4CQ9H3R0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms