Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.68■■□□□ 1.86
RPGRIP1Q96KN7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.68■■□□□ 1.86
RPGRIP1Q96KN7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RPGRIP1Q96KN7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.67■■□□□ 1.86
RPGRIP1Q96KN7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPGRIP1Q96KN7 DUX4L18-201ENST00000553347 1267 ntBASIC26.67■■□□□ 1.86
RPGRIP1Q96KN7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
RPGRIP1Q96KN7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPGRIP1Q96KN7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.66■■□□□ 1.86
RPGRIP1Q96KN7 AC145676.1-201ENST00000514988 2004 ntBASIC26.66■■□□□ 1.86
RPGRIP1Q96KN7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPGRIP1Q96KN7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
RPGRIP1Q96KN7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.66■■□□□ 1.86
RPGRIP1Q96KN7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPGRIP1Q96KN7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPGRIP1Q96KN7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPGRIP1Q96KN7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPGRIP1Q96KN7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPGRIP1Q96KN7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.65■■□□□ 1.86
RPGRIP1Q96KN7 AL035685.1-201ENST00000636663 812 ntBASIC26.65■■□□□ 1.86
RPGRIP1Q96KN7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
RPGRIP1Q96KN7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.65■■□□□ 1.86
RPGRIP1Q96KN7 AP002414.2-202ENST00000590929 1450 ntBASIC26.64■■□□□ 1.86
RPGRIP1Q96KN7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.64■■□□□ 1.86
RPGRIP1Q96KN7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RPGRIP1Q96KN7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RPGRIP1Q96KN7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RPGRIP1Q96KN7 AC100797.4-201ENST00000631653 1827 ntBASIC26.63■■□□□ 1.85
RPGRIP1Q96KN7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.63■■□□□ 1.85
RPGRIP1Q96KN7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.63■■□□□ 1.85
RPGRIP1Q96KN7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.63■■□□□ 1.85
RPGRIP1Q96KN7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPGRIP1Q96KN7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.62■■□□□ 1.85
RPGRIP1Q96KN7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPGRIP1Q96KN7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
RPGRIP1Q96KN7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.62■■□□□ 1.85
RPGRIP1Q96KN7 AC129492.7-201ENST00000622992 756 ntBASIC26.62■■□□□ 1.85
RPGRIP1Q96KN7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPGRIP1Q96KN7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RPGRIP1Q96KN7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RPGRIP1Q96KN7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.6■■□□□ 1.85
RPGRIP1Q96KN7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.6■■□□□ 1.85
RPGRIP1Q96KN7 AC126177.7-201ENST00000547904 679 ntBASIC26.6■■□□□ 1.85
RPGRIP1Q96KN7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RPGRIP1Q96KN7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
RPGRIP1Q96KN7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RPGRIP1Q96KN7 AC020928.2-201ENST00000588717 2197 ntBASIC26.59■■□□□ 1.85
RPGRIP1Q96KN7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RPGRIP1Q96KN7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RPGRIP1Q96KN7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RPGRIP1Q96KN7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 AL451085.2-201ENST00000605085 799 ntBASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
RPGRIP1Q96KN7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.57■■□□□ 1.84
RPGRIP1Q96KN7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RPGRIP1Q96KN7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.56■■□□□ 1.84
RPGRIP1Q96KN7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RPGRIP1Q96KN7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RPGRIP1Q96KN7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RPGRIP1Q96KN7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.56■■□□□ 1.84
RPGRIP1Q96KN7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.56■■□□□ 1.84
RPGRIP1Q96KN7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RPGRIP1Q96KN7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RPGRIP1Q96KN7 AL592295.1-201ENST00000400984 884 ntBASIC26.55■■□□□ 1.84
RPGRIP1Q96KN7 AL592293.1-201ENST00000502889 1188 ntBASIC26.55■■□□□ 1.84
RPGRIP1Q96KN7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.55■■□□□ 1.84
RPGRIP1Q96KN7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RPGRIP1Q96KN7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RPGRIP1Q96KN7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RPGRIP1Q96KN7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 AC133552.2-201ENST00000619106 1032 ntBASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RPGRIP1Q96KN7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RPGRIP1Q96KN7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.52■■□□□ 1.84
RPGRIP1Q96KN7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RPGRIP1Q96KN7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.52■■□□□ 1.84
RPGRIP1Q96KN7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.51■■□□□ 1.83
RPGRIP1Q96KN7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RPGRIP1Q96KN7 AC007029.1-201ENST00000604183 313 ntBASIC26.51■■□□□ 1.83
RPGRIP1Q96KN7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RPGRIP1Q96KN7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.51■■□□□ 1.83
RPGRIP1Q96KN7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms