Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrfn1Q2WF71 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.2■□□□□ 0.82
Lrfn1Q2WF71 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.2■□□□□ 0.82
Lrfn1Q2WF71 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrfn1Q2WF71 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lrfn1Q2WF71 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrfn1Q2WF71 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn1Q2WF71 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrfn1Q2WF71 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lrfn1Q2WF71 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrfn1Q2WF71 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrfn1Q2WF71 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lrfn1Q2WF71 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn1Q2WF71 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lrfn1Q2WF71 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn1Q2WF71 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn1Q2WF71 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn1Q2WF71 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn1Q2WF71 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn1Q2WF71 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrfn1Q2WF71 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrfn1Q2WF71 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lrfn1Q2WF71 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrfn1Q2WF71 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrfn1Q2WF71 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.15■□□□□ 0.82
Lrfn1Q2WF71 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn1Q2WF71 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn1Q2WF71 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn1Q2WF71 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Lrfn1Q2WF71 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrfn1Q2WF71 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrfn1Q2WF71 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrfn1Q2WF71 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.14■□□□□ 0.81
Lrfn1Q2WF71 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lrfn1Q2WF71 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lrfn1Q2WF71 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrfn1Q2WF71 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.12■□□□□ 0.81
Lrfn1Q2WF71 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lrfn1Q2WF71 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrfn1Q2WF71 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrfn1Q2WF71 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lrfn1Q2WF71 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lrfn1Q2WF71 Gm30023-201ENSMUST00000197970 889 ntBASIC20.11■□□□□ 0.81
Lrfn1Q2WF71 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Lrfn1Q2WF71 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lrfn1Q2WF71 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrfn1Q2WF71 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrfn1Q2WF71 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrfn1Q2WF71 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Lrfn1Q2WF71 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrfn1Q2WF71 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrfn1Q2WF71 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lrfn1Q2WF71 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.08■□□□□ 0.8
Lrfn1Q2WF71 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.07■□□□□ 0.8
Lrfn1Q2WF71 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrfn1Q2WF71 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lrfn1Q2WF71 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lrfn1Q2WF71 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrfn1Q2WF71 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrfn1Q2WF71 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.06■□□□□ 0.8
Lrfn1Q2WF71 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lrfn1Q2WF71 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms