Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LSM3P62310 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LSM3P62310 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LSM3P62310 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM3P62310 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM3P62310 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM3P62310 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM3P62310 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.85■■□□□ 1.09
LSM3P62310 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM3P62310 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.84■■□□□ 1.09
LSM3P62310 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM3P62310 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LSM3P62310 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.84■■□□□ 1.09
LSM3P62310 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.84■■□□□ 1.09
LSM3P62310 AC068473.5-201ENST00000616428 2072 ntBASIC21.84■■□□□ 1.09
LSM3P62310 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM3P62310 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM3P62310 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LSM3P62310 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM3P62310 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.83■■□□□ 1.09
LSM3P62310 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSM3P62310 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSM3P62310 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LSM3P62310 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSM3P62310 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LSM3P62310 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.83■■□□□ 1.09
LSM3P62310 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSM3P62310 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LSM3P62310 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.83■■□□□ 1.08
LSM3P62310 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LSM3P62310 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSM3P62310 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSM3P62310 AC010501.1-201ENST00000606270 1962 ntBASIC21.81■■□□□ 1.08
LSM3P62310 AC142472.1-201ENST00000612013 1741 ntBASIC21.81■■□□□ 1.08
LSM3P62310 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSM3P62310 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSM3P62310 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSM3P62310 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSM3P62310 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSM3P62310 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.8■■□□□ 1.08
LSM3P62310 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSM3P62310 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.79■■□□□ 1.08
LSM3P62310 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSM3P62310 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LSM3P62310 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.79■■□□□ 1.08
LSM3P62310 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSM3P62310 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSM3P62310 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.78■■□□□ 1.08
LSM3P62310 AP002365.1-201ENST00000603448 772 ntBASIC21.78■■□□□ 1.08
LSM3P62310 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSM3P62310 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LSM3P62310 AC135983.2-203ENST00000454486 1613 ntBASIC21.77■■□□□ 1.08
LSM3P62310 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LSM3P62310 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.77■■□□□ 1.08
LSM3P62310 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LSM3P62310 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
LSM3P62310 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.76■■□□□ 1.07
LSM3P62310 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LSM3P62310 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
LSM3P62310 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LSM3P62310 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.76■■□□□ 1.07
LSM3P62310 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LSM3P62310 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LSM3P62310 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.76■■□□□ 1.07
LSM3P62310 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LSM3P62310 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LSM3P62310 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LSM3P62310 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LSM3P62310 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LSM3P62310 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
LSM3P62310 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
LSM3P62310 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
LSM3P62310 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LSM3P62310 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LSM3P62310 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
LSM3P62310 WHAMMP2-203ENST00000563942 1603 ntBASIC21.73■■□□□ 1.07
LSM3P62310 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.73■■□□□ 1.07
LSM3P62310 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSM3P62310 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSM3P62310 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.73■■□□□ 1.07
LSM3P62310 AC079834.2-201ENST00000609776 1949 ntBASIC21.73■■□□□ 1.07
LSM3P62310 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSM3P62310 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LSM3P62310 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.73■■□□□ 1.07
LSM3P62310 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSM3P62310 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.72■■□□□ 1.07
LSM3P62310 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LSM3P62310 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LSM3P62310 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
LSM3P62310 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSM3P62310 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.72■■□□□ 1.07
LSM3P62310 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LSM3P62310 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSM3P62310 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSM3P62310 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSM3P62310 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSM3P62310 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LSM3P62310 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSM3P62310 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.71■■□□□ 1.07
LSM3P62310 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms