Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 tG(GCC)D1tG(GCC)D1 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)D2tG(GCC)D2 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)EtG(GCC)E 71 nt5.69□□□□□ -1.5
CAF40P53829 SUF20tG(GCC)F1 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)F2tG(GCC)F2 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)G1tG(GCC)G1 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)G2tG(GCC)G2 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)J1tG(GCC)J1 71 nt5.69□□□□□ -1.5
CAF40P53829 SUF23tG(GCC)J2 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)MtG(GCC)M 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)O1tG(GCC)O1 71 nt5.69□□□□□ -1.5
CAF40P53829 SUF17tG(GCC)O2 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)P1tG(GCC)P1 71 nt5.69□□□□□ -1.5
CAF40P53829 tG(GCC)P2tG(GCC)P2 71 nt5.69□□□□□ -1.5
CAF40P53829 YBR113WYBR113W 483 nt5.69□□□□□ -1.5
CAF40P53829 NSE5YML023C 1671 nt5.69□□□□□ -1.5
CAF40P53829 GPB2YAL056W 2643 nt5.68□□□□□ -1.5
CAF40P53829 MRPL1YDR116C 858 nt5.68□□□□□ -1.5
CAF40P53829 ELP4YPL101W 1371 nt5.67□□□□□ -1.5
CAF40P53829 YOL036WYOL036W 2286 nt5.67□□□□□ -1.5
CAF40P53829 YDL177CYDL177C 513 nt5.67□□□□□ -1.5
CAF40P53829 SPG1YGR236C 288 nt5.67□□□□□ -1.5
CAF40P53829 RPP1YHR062C 882 nt5.67□□□□□ -1.5
CAF40P53829 MRP51YPL118W 1035 nt5.67□□□□□ -1.5
CAF40P53829 MSI1YBR195C 1269 nt5.67□□□□□ -1.5
CAF40P53829 NPL6YMR091C 1308 nt5.67□□□□□ -1.5
CAF40P53829 ELP3YPL086C 1674 nt5.66□□□□□ -1.5
CAF40P53829 SFB3YHR098C 2790 nt5.66□□□□□ -1.5
CAF40P53829 YIR007WYIR007W 2295 nt5.66□□□□□ -1.5
CAF40P53829 YPQ2YDR352W 954 nt5.66□□□□□ -1.5
CAF40P53829 DMA1YHR115C 1251 nt5.66□□□□□ -1.5
CAF40P53829 CBR1YIL043C 855 nt5.66□□□□□ -1.5
CAF40P53829 TAD2YJL035C 753 nt5.66□□□□□ -1.5
CAF40P53829 EFM3YJR129C 1020 nt5.66□□□□□ -1.5
CAF40P53829 ATF1YOR377W 1578 nt5.66□□□□□ -1.5
CAF40P53829 KEX2YNL238W 2445 nt5.66□□□□□ -1.5
CAF40P53829 MPA43YNL249C 1629 nt5.66□□□□□ -1.5
CAF40P53829 YFL052WYFL052W 1398 nt5.66□□□□□ -1.5
CAF40P53829 THI2YBR240C 1353 nt5.66□□□□□ -1.5
CAF40P53829 NUP53YMR153W 1428 nt5.65□□□□□ -1.5
CAF40P53829 CHS5YLR330W 2016 nt5.65□□□□□ -1.5
CAF40P53829 CMR1YDL156W 1569 nt5.65□□□□□ -1.5
CAF40P53829 YHL017WYHL017W 1599 nt5.65□□□□□ -1.5
CAF40P53829 YLR312CYLR312C 1197 nt5.65□□□□□ -1.5
CAF40P53829 YML122CYML122C 381 nt5.65□□□□□ -1.5
CAF40P53829 YHM2YMR241W 945 nt5.65□□□□□ -1.5
CAF40P53829 PZF1YPR186C 1290 nt5.65□□□□□ -1.5
CAF40P53829 MPE1YKL059C 1326 nt5.65□□□□□ -1.51
CAF40P53829 TUB1YML085C 1344 nt5.65□□□□□ -1.51
CAF40P53829 CRZ1YNL027W 2037 nt5.65□□□□□ -1.51
CAF40P53829 YDR476CYDR476C 675 nt5.64□□□□□ -1.51
CAF40P53829 HEM2YGL040C 1029 nt5.64□□□□□ -1.51
CAF40P53829 NMA2YGR010W 1188 nt5.64□□□□□ -1.51
CAF40P53829 YLR123CYLR123C 330 nt5.64□□□□□ -1.51
CAF40P53829 NFS1YCL017C 1494 nt5.64□□□□□ -1.51
CAF40P53829 TNA1YGR260W 1605 nt5.63□□□□□ -1.51
CAF40P53829 SQT1YIR012W 1296 nt5.63□□□□□ -1.51
CAF40P53829 RTC4YNL254C 1206 nt5.63□□□□□ -1.51
CAF40P53829 YMR034CYMR034C 1305 nt5.63□□□□□ -1.51
CAF40P53829 DBP9YLR276C 1785 nt5.62□□□□□ -1.51
CAF40P53829 RPL7AYGL076C 735 nt5.62□□□□□ -1.51
CAF40P53829 YSC83YHR017W 1158 nt5.62□□□□□ -1.51
CAF40P53829 GEP5YLR091W 882 nt5.62□□□□□ -1.51
CAF40P53829 RPL7BYPL198W 735 nt5.62□□□□□ -1.51
CAF40P53829 HXT17YNR072W 1695 nt5.62□□□□□ -1.51
CAF40P53829 PGM1YKL127W 1713 nt5.62□□□□□ -1.51
CAF40P53829 PYC2YBR218C 3543 nt5.62□□□□□ -1.51
CAF40P53829 SUB2YDL084W 1341 nt5.61□□□□□ -1.51
CAF40P53829 YFR006WYFR006W 1608 nt5.61□□□□□ -1.51
CAF40P53829 TEL2YGR099W 2067 nt5.61□□□□□ -1.51
CAF40P53829 GDH1YOR375C 1365 nt5.61□□□□□ -1.51
CAF40P53829 ERG10YPL028W 1197 nt5.61□□□□□ -1.51
CAF40P53829 VPS4YPR173C 1314 nt5.6□□□□□ -1.51
CAF40P53829 YML083CYML083C 1257 nt5.6□□□□□ -1.51
CAF40P53829 REG2YBR050C 1017 nt5.6□□□□□ -1.51
CAF40P53829 YPR123CYPR123C 435 nt5.6□□□□□ -1.51
CAF40P53829 CCC2YDR270W 3015 nt5.59□□□□□ -1.51
CAF40P53829 TFC6YDR362C 2019 nt5.59□□□□□ -1.51
CAF40P53829 CWC21YDR482C 408 nt5.59□□□□□ -1.51
CAF40P53829 PTC7YHR076W 1032 nt5.59□□□□□ -1.51
CAF40P53829 NHP6BYBR089C-A 300 nt5.59□□□□□ -1.51
CAF40P53829 GAA1YLR088W 1845 nt5.59□□□□□ -1.51
CAF40P53829 STT3YGL022W 2157 nt5.59□□□□□ -1.52
CAF40P53829 MSY1YPL097W 1479 nt5.58□□□□□ -1.52
CAF40P53829 BSC4YNL269W 396 nt5.58□□□□□ -1.52
CAF40P53829 CPA1YOR303W 1236 nt5.58□□□□□ -1.52
CAF40P53829 PCS60YBR222C 1632 nt5.58□□□□□ -1.52
CAF40P53829 RNR3YIL066C 2610 nt5.58□□□□□ -1.52
CAF40P53829 EDE1YBL047C 4146 nt5.58□□□□□ -1.52
CAF40P53829 YHR145CYHR145C 357 nt5.57□□□□□ -1.52
CAF40P53829 COA1YIL157C 594 nt5.57□□□□□ -1.52
CAF40P53829 MIA40YKL195W 1212 nt5.57□□□□□ -1.52
CAF40P53829 ADE1YAR015W 921 nt5.57□□□□□ -1.52
CAF40P53829 DFR1YOR236W 636 nt5.57□□□□□ -1.52
CAF40P53829 HST2YPL015C 1074 nt5.57□□□□□ -1.52
CAF40P53829 GEX1YCL073C 1848 nt5.57□□□□□ -1.52
CAF40P53829 GEX2YKR106W 1848 nt5.57□□□□□ -1.52
CAF40P53829 EPS1YIL005W 2106 nt5.57□□□□□ -1.52
CAF40P53829 CST6YIL036W 1764 nt5.57□□□□□ -1.52
CAF40P53829 CLB1YGR108W 1416 nt5.57□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms