Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL139125.2-201ENST00000623134 1869 ntBASIC19.79■□□□□ 0.76
NKX2-1P43699 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-1P43699 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NKX2-1P43699 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-1P43699 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-1P43699 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
NKX2-1P43699 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-1P43699 AC005559.1-201ENST00000589661 871 ntBASIC19.79■□□□□ 0.76
NKX2-1P43699 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
NKX2-1P43699 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-1P43699 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-1P43699 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-1P43699 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-1P43699 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.78■□□□□ 0.76
NKX2-1P43699 MIR6090-201ENST00000622481 60 ntBASIC19.78■□□□□ 0.76
NKX2-1P43699 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-1P43699 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-1P43699 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-1P43699 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-1P43699 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-1P43699 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-1P43699 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-1P43699 AC138932.3-201ENST00000567634 1902 ntBASIC19.78■□□□□ 0.76
NKX2-1P43699 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NKX2-1P43699 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-1P43699 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-1P43699 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.77■□□□□ 0.76
NKX2-1P43699 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-1P43699 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-1P43699 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-1P43699 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.76■□□□□ 0.75
NKX2-1P43699 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-1P43699 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-1P43699 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX2-1P43699 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-1P43699 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NKX2-1P43699 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-1P43699 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-1P43699 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-1P43699 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-1P43699 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.75■□□□□ 0.75
NKX2-1P43699 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-1P43699 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-1P43699 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-1P43699 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NKX2-1P43699 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-1P43699 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-1P43699 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.75■□□□□ 0.75
NKX2-1P43699 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.75■□□□□ 0.75
NKX2-1P43699 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-1P43699 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.75■□□□□ 0.75
NKX2-1P43699 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-1P43699 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-1P43699 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NKX2-1P43699 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NKX2-1P43699 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NKX2-1P43699 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-1P43699 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.73■□□□□ 0.75
NKX2-1P43699 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-1P43699 AC110285.7-201ENST00000624417 1536 ntBASIC19.73■□□□□ 0.75
NKX2-1P43699 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.73■□□□□ 0.75
NKX2-1P43699 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-1P43699 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NKX2-1P43699 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-1P43699 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX2-1P43699 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-1P43699 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX2-1P43699 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-1P43699 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-1P43699 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-1P43699 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
NKX2-1P43699 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-1P43699 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NKX2-1P43699 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-1P43699 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-1P43699 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-1P43699 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-1P43699 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-1P43699 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-1P43699 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-1P43699 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.71■□□□□ 0.75
NKX2-1P43699 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-1P43699 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-1P43699 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NKX2-1P43699 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
NKX2-1P43699 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NKX2-1P43699 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-1P43699 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-1P43699 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-1P43699 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-1P43699 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-1P43699 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NKX2-1P43699 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-1P43699 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-1P43699 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-1P43699 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-1P43699 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-1P43699 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-1P43699 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-1P43699 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms