Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF1O43189 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF1O43189 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.85■□□□□ 0.93
PHF1O43189 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.85■□□□□ 0.93
PHF1O43189 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.85■□□□□ 0.93
PHF1O43189 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF1O43189 AP002414.2-202ENST00000590929 1450 ntBASIC20.85■□□□□ 0.93
PHF1O43189 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF1O43189 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF1O43189 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF1O43189 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHF1O43189 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHF1O43189 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.84■□□□□ 0.93
PHF1O43189 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF1O43189 AC019069.1-201ENST00000610008 1333 ntBASIC20.83■□□□□ 0.93
PHF1O43189 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHF1O43189 KRT18P60-201ENST00000312876 1297 ntBASIC20.83■□□□□ 0.93
PHF1O43189 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.83■□□□□ 0.93
PHF1O43189 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PHF1O43189 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHF1O43189 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PHF1O43189 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PHF1O43189 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.82■□□□□ 0.92
PHF1O43189 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF1O43189 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHF1O43189 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.82■□□□□ 0.92
PHF1O43189 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.81■□□□□ 0.92
PHF1O43189 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PHF1O43189 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PHF1O43189 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF1O43189 AC060814.1-201ENST00000554326 538 ntBASIC20.81■□□□□ 0.92
PHF1O43189 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.8■□□□□ 0.92
PHF1O43189 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHF1O43189 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHF1O43189 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHF1O43189 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHF1O43189 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.79■□□□□ 0.92
PHF1O43189 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PHF1O43189 AC091060.1-201ENST00000623524 1766 ntBASIC20.79■□□□□ 0.92
PHF1O43189 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.78■□□□□ 0.92
PHF1O43189 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHF1O43189 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.78■□□□□ 0.92
PHF1O43189 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.78■□□□□ 0.92
PHF1O43189 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHF1O43189 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.78■□□□□ 0.92
PHF1O43189 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.78■□□□□ 0.92
PHF1O43189 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PHF1O43189 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHF1O43189 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.77■□□□□ 0.92
PHF1O43189 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHF1O43189 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHF1O43189 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.77■□□□□ 0.92
PHF1O43189 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHF1O43189 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHF1O43189 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHF1O43189 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHF1O43189 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PHF1O43189 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PHF1O43189 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PHF1O43189 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PHF1O43189 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 AL592295.1-201ENST00000400984 884 ntBASIC20.76■□□□□ 0.91
PHF1O43189 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.76■□□□□ 0.91
PHF1O43189 AC126177.7-201ENST00000547904 679 ntBASIC20.76■□□□□ 0.91
PHF1O43189 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PHF1O43189 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHF1O43189 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHF1O43189 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHF1O43189 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHF1O43189 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF1O43189 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF1O43189 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.74■□□□□ 0.91
PHF1O43189 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.74■□□□□ 0.91
PHF1O43189 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHF1O43189 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHF1O43189 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHF1O43189 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHF1O43189 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHF1O43189 AL035685.1-201ENST00000636663 812 ntBASIC20.73■□□□□ 0.91
PHF1O43189 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PHF1O43189 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHF1O43189 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.72■□□□□ 0.91
PHF1O43189 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.72■□□□□ 0.91
PHF1O43189 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF1O43189 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PHF1O43189 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.71■□□□□ 0.91
PHF1O43189 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHF1O43189 AL359258.2-201ENST00000564063 1566 ntBASIC20.71■□□□□ 0.91
PHF1O43189 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.7■□□□□ 0.91
PHF1O43189 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHF1O43189 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF1O43189 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PHF1O43189 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms