Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 CR559946.2-201ENST00000623684 991 ntBASIC17.44■□□□□ 0.38
RS1O15537 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.44■□□□□ 0.38
RS1O15537 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RS1O15537 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RS1O15537 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RS1O15537 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RS1O15537 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RS1O15537 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RS1O15537 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RS1O15537 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RS1O15537 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
RS1O15537 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.43■□□□□ 0.38
RS1O15537 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RS1O15537 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RS1O15537 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RS1O15537 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RS1O15537 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RS1O15537 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RS1O15537 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RS1O15537 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RS1O15537 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.42■□□□□ 0.38
RS1O15537 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RS1O15537 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RS1O15537 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RS1O15537 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RS1O15537 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RS1O15537 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.41■□□□□ 0.38
RS1O15537 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RS1O15537 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RS1O15537 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RS1O15537 AC010501.1-201ENST00000606270 1962 ntBASIC17.4■□□□□ 0.38
RS1O15537 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RS1O15537 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.4■□□□□ 0.38
RS1O15537 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RS1O15537 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.4■□□□□ 0.38
RS1O15537 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.4■□□□□ 0.38
RS1O15537 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.4■□□□□ 0.38
RS1O15537 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RS1O15537 MIR3648-2-201ENST00000581792 180 ntBASIC17.39■□□□□ 0.37
RS1O15537 MIR3648-1-201ENST00000615959 180 ntBASIC17.39■□□□□ 0.37
RS1O15537 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RS1O15537 AC020928.2-201ENST00000588717 2197 ntBASIC17.39■□□□□ 0.37
RS1O15537 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RS1O15537 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RS1O15537 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RS1O15537 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RS1O15537 AC126177.7-201ENST00000547904 679 ntBASIC17.38■□□□□ 0.37
RS1O15537 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.38■□□□□ 0.37
RS1O15537 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RS1O15537 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.38■□□□□ 0.37
RS1O15537 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RS1O15537 AL359504.2-201ENST00000605506 1601 ntBASIC17.38■□□□□ 0.37
RS1O15537 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.38■□□□□ 0.37
RS1O15537 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RS1O15537 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RS1O15537 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RS1O15537 ERN1-208ENST00000606895 2068 ntBASIC17.37■□□□□ 0.37
RS1O15537 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RS1O15537 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RS1O15537 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RS1O15537 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RS1O15537 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RS1O15537 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RS1O15537 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RS1O15537 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RS1O15537 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RS1O15537 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.35■□□□□ 0.37
RS1O15537 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RS1O15537 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RS1O15537 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RS1O15537 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RS1O15537 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RS1O15537 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RS1O15537 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RS1O15537 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.34■□□□□ 0.37
RS1O15537 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.34■□□□□ 0.37
RS1O15537 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.34■□□□□ 0.37
RS1O15537 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.34■□□□□ 0.37
RS1O15537 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.33■□□□□ 0.37
RS1O15537 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RS1O15537 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RS1O15537 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RS1O15537 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.33■□□□□ 0.36
RS1O15537 AC016575.1-201ENST00000607026 382 ntBASIC17.33■□□□□ 0.36
RS1O15537 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RS1O15537 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.33■□□□□ 0.36
RS1O15537 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RS1O15537 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RS1O15537 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RS1O15537 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RS1O15537 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RS1O15537 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RS1O15537 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RS1O15537 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RS1O15537 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RS1O15537 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RS1O15537 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RS1O15537 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RS1O15537 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RS1O15537 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms