Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MAP4-206ENST00000423088 899 ntTSL 310.88□□□□□ -0.675e-6■■■■□ 20.2
NKRFO15226 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.89□□□□□ -0.995e-6■■■■□ 20.2
NKRFO15226 ALOX12-AS1-202ENST00000399541 665 ntTSL 28.82□□□□□ -15e-6■■■■□ 20.2
NKRFO15226 NGDN-211ENST00000556699 725 ntTSL 26.8□□□□□ -1.325e-6■■■■□ 20.2
NKRFO15226 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.345e-6■■■■□ 20.2
NKRFO15226 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.425e-6■■■■□ 20.2
NKRFO15226 IFRD1-208ENST00000443101 440 ntTSL 36.19□□□□□ -1.425e-6■■■■□ 20.2
NKRFO15226 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.18□□□□□ -1.425e-6■■■■□ 20.2
NKRFO15226 ZNF395-209ENST00000522795 501 ntTSL 314.45□□□□□ -0.11e-7■■■■□ 20.1
NKRFO15226 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.135e-7■■■■□ 20.1
NKRFO15226 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.045e-7■■■■□ 20.1
NKRFO15226 KCTD6-206ENST00000491093 408 ntTSL 513.44□□□□□ -0.265e-7■■■■□ 20.1
NKRFO15226 BRD3-203ENST00000371842 574 ntTSL 517.27■□□□□ 0.362e-6■■■■□ 20.1
NKRFO15226 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.052e-6■■■■□ 20
NKRFO15226 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.62□□□□□ -0.072e-6■■■■□ 20
NKRFO15226 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.61■■■□□ 2.179e-8■■■■□ 20
NKRFO15226 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.89■■■□□ 2.069e-8■■■■□ 20
NKRFO15226 TBX2-AS1-204ENST00000591313 640 ntTSL 221.73■■□□□ 1.079e-8■■■■□ 20
NKRFO15226 TBX2-AS1-205ENST00000592009 330 ntTSL 319.18■□□□□ 0.669e-8■■■■□ 20
NKRFO15226 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC12.66□□□□□ -0.389e-8■■■■□ 20
NKRFO15226 SLC12A4-208ENST00000572010 1016 ntTSL 1 (best)24.94■■□□□ 1.581e-7■■■■□ 20
NKRFO15226 SLC12A4-217ENST00000576462 673 ntTSL 223.31■■□□□ 1.321e-7■■■■□ 20
NKRFO15226 SLC12A4-207ENST00000571299 891 ntTSL 318.55■□□□□ 0.561e-7■■■■□ 20
NKRFO15226 SLC12A4-216ENST00000576377 868 ntTSL 517.45■□□□□ 0.381e-7■■■■□ 20
NKRFO15226 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.672e-6■■■■□ 20
NKRFO15226 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.72e-6■■■■□ 20
NKRFO15226 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.392e-6■■■■□ 20
NKRFO15226 ZNF395-203ENST00000517459 224 ntTSL 223.3■■□□□ 1.321e-7■■■■□ 20
NKRFO15226 ZNF395-207ENST00000521185 584 ntTSL 421.76■■□□□ 1.071e-7■■■■□ 20
NKRFO15226 ZNF395-205ENST00000520290 703 ntTSL 520.35■□□□□ 0.851e-7■■■■□ 20
NKRFO15226 FBXO16-210ENST00000521548 2983 ntTSL 214.99□□□□□ -0.011e-7■■■■□ 20
NKRFO15226 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-7■■■■□ 20
NKRFO15226 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.416e-7■■■■□ 19.9
NKRFO15226 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.65■■□□□ 1.386e-7■■■■□ 19.9
NKRFO15226 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.326e-7■■■■□ 19.9
NKRFO15226 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.98■□□□□ 0.796e-7■■■■□ 19.9
NKRFO15226 TNS1-216ENST00000480665 758 ntTSL 217.62■□□□□ 0.413e-6■■■■□ 19.9
NKRFO15226 AL365205.1-203ENST00000335515 2871 ntTSL 215.55■□□□□ 0.088e-16■■■■□ 19.9
NKRFO15226 NFE2L2-207ENST00000448782 975 ntTSL 1 (best)13.66□□□□□ -0.228e-16■■■■□ 19.9
NKRFO15226 NFE2L2-212ENST00000477534 930 ntTSL 1 (best)7.2□□□□□ -1.268e-16■■■■□ 19.9
NKRFO15226 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.338e-16■■■■□ 19.9
NKRFO15226 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.033e-8■■■■□ 19.9
NKRFO15226 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.023e-8■■■■□ 19.9
NKRFO15226 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.123e-8■■■■□ 19.9
NKRFO15226 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.932e-8■■■■□ 19.9
NKRFO15226 ING5-206ENST00000482774 2376 ntTSL 320.15■□□□□ 0.822e-8■■■■□ 19.9
NKRFO15226 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.422e-8■■■■□ 19.9
NKRFO15226 ING5-210ENST00000492488 822 ntTSL 217.64■□□□□ 0.412e-8■■■■□ 19.9
NKRFO15226 ING5-209ENST00000489509 920 ntTSL 217.48■□□□□ 0.392e-8■■■■□ 19.9
NKRFO15226 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.91■□□□□ 0.32e-8■■■■□ 19.9
NKRFO15226 ING5-211ENST00000493261 543 ntTSL 213□□□□□ -0.332e-8■■■■□ 19.9
NKRFO15226 ING5-204ENST00000445620 662 ntTSL 37.34□□□□□ -1.232e-8■■■■□ 19.9
NKRFO15226 CDC42EP1-203ENST00000430687 720 ntAPPRIS ALT2 TSL 320.62■□□□□ 0.894e-7■■■■□ 19.9
NKRFO15226 CDC14B-207ENST00000463547 553 ntTSL 417.4■□□□□ 0.381e-6■■■■□ 19.8
NKRFO15226 CDC14B-205ENST00000415608 684 ntTSL 58.29□□□□□ -1.081e-6■■■■□ 19.8
NKRFO15226 PIGZ-203ENST00000413127 1947 ntTSL 220.94■□□□□ 0.946e-11■■■■□ 19.8
NKRFO15226 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.816e-11■■■■□ 19.8
NKRFO15226 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.63■□□□□ 0.576e-11■■■■□ 19.8
NKRFO15226 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.724e-6■■■■□ 19.8
NKRFO15226 FAM222B-203ENST00000577376 720 ntTSL 228.94■■■□□ 2.222e-6■■■■□ 19.8
NKRFO15226 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.2■■■□□ 2.12e-6■■■■□ 19.8
NKRFO15226 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.52■■□□□ 1.682e-6■■■■□ 19.8
NKRFO15226 FAM222B-206ENST00000579381 462 ntTSL 525.52■■□□□ 1.682e-6■■■■□ 19.8
NKRFO15226 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.48■■□□□ 1.672e-6■■■■□ 19.8
NKRFO15226 FAM222B-207ENST00000581229 598 ntTSL 424■■□□□ 1.432e-6■■■■□ 19.8
NKRFO15226 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.74■□□□□ 0.592e-6■■■■□ 19.8
NKRFO15226 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.272e-6■■■■□ 19.8
NKRFO15226 FAM222B-212ENST00000583307 886 ntTSL 212.42□□□□□ -0.422e-6■■■■□ 19.8
NKRFO15226 FAM222B-204ENST00000577513 731 ntTSL 311.28□□□□□ -0.62e-6■■■■□ 19.8
NKRFO15226 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC10.26□□□□□ -0.772e-6■■■■□ 19.8
NKRFO15226 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.481e-6■■■■□ 19.7
NKRFO15226 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.883e-7■■■■□ 19.7
NKRFO15226 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.061e-6■■■■□ 19.7
NKRFO15226 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.5■■□□□ 1.518e-9■■■■□ 19.7
NKRFO15226 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.54■■□□□ 1.27e-7■■■■□ 19.7
NKRFO15226 BAIAP2-230ENST00000577097 1014 ntTSL 321.39■■□□□ 1.011e-6■■■■□ 19.7
NKRFO15226 BAIAP2-225ENST00000576225 2316 ntTSL 220.4■□□□□ 0.861e-6■■■■□ 19.7
NKRFO15226 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.277e-7■■■■□ 19.7
NKRFO15226 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.68■□□□□ 0.267e-7■■■■□ 19.7
NKRFO15226 BAIAP2-222ENST00000575841 509 ntTSL 214.25□□□□□ -0.131e-6■■■■□ 19.7
NKRFO15226 TMCO3-204ENST00000462877 491 ntTSL 29.43□□□□□ -0.97e-7■■■■□ 19.7
NKRFO15226 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.55■■□□□ 1.529e-7■■■■□ 19.7
NKRFO15226 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.33■□□□□ 0.539e-7■■■■□ 19.7
NKRFO15226 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.02■□□□□ 0.313e-6■■■■□ 19.7
NKRFO15226 TNS3-211ENST00000474346 775 ntTSL 315.48■□□□□ 0.075e-7■■■■□ 19.6
NKRFO15226 PHF12-212ENST00000583524 1875 ntTSL 1 (best)30.29■■■□□ 2.443e-9■■■■□ 19.6
NKRFO15226 TFG-205ENST00000479672 776 ntTSL 326.96■■□□□ 1.913e-9■■■■□ 19.6
NKRFO15226 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.23■■□□□ 1.473e-9■■■■□ 19.6
NKRFO15226 PHF12-213ENST00000583747 648 ntTSL 324.01■■□□□ 1.433e-9■■■■□ 19.6
NKRFO15226 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.353e-9■■■■□ 19.6
NKRFO15226 PHF12-211ENST00000582853 555 ntTSL 423.34■■□□□ 1.333e-9■■■■□ 19.6
NKRFO15226 PHF12-203ENST00000378879 2963 ntTSL 522.52■■□□□ 1.23e-9■■■■□ 19.6
NKRFO15226 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.85■□□□□ 0.933e-9■■■■□ 19.6
NKRFO15226 TFG-207ENST00000487505 913 ntTSL 320.82■□□□□ 0.923e-9■■■■□ 19.6
NKRFO15226 TFG-203ENST00000463568 723 ntTSL 319.64■□□□□ 0.733e-9■■■■□ 19.6
NKRFO15226 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.713e-9■■■■□ 19.6
NKRFO15226 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.54■□□□□ 0.43e-9■■■■□ 19.6
NKRFO15226 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.77■□□□□ 0.282e-6■■■■□ 19.6
NKRFO15226 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 03e-9■■■■□ 19.6
NKRFO15226 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.093e-9■■■■□ 19.6
Retrieved 100 of 9,198 protein–RNA pairs in 226.9 ms