Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV30A0A087WSZ9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRAV30A0A087WSZ9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV30A0A087WSZ9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV30A0A087WSZ9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV30A0A087WSZ9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV30A0A087WSZ9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV30A0A087WSZ9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TRAV30A0A087WSZ9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV30A0A087WSZ9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV30A0A087WSZ9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV30A0A087WSZ9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV30A0A087WSZ9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV30A0A087WSZ9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV30A0A087WSZ9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV30A0A087WSZ9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV30A0A087WSZ9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19■□□□□ 0.63
TRAV30A0A087WSZ9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV30A0A087WSZ9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV30A0A087WSZ9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV30A0A087WSZ9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV30A0A087WSZ9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.98■□□□□ 0.63
TRAV30A0A087WSZ9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV30A0A087WSZ9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV30A0A087WSZ9 AC126177.7-201ENST00000547904 679 ntBASIC18.98■□□□□ 0.63
TRAV30A0A087WSZ9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV30A0A087WSZ9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV30A0A087WSZ9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV30A0A087WSZ9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 AL359258.2-201ENST00000564063 1566 ntBASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV30A0A087WSZ9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV30A0A087WSZ9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV30A0A087WSZ9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV30A0A087WSZ9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV30A0A087WSZ9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRAV30A0A087WSZ9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV30A0A087WSZ9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
TRAV30A0A087WSZ9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV30A0A087WSZ9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV30A0A087WSZ9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
TRAV30A0A087WSZ9 HLA-V-202ENST00000446817 847 ntBASIC18.95■□□□□ 0.62
TRAV30A0A087WSZ9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV30A0A087WSZ9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV30A0A087WSZ9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 AC010501.1-201ENST00000606270 1962 ntBASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV30A0A087WSZ9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 ABHD17AP4-201ENST00000411545 909 ntBASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV30A0A087WSZ9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV30A0A087WSZ9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV30A0A087WSZ9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV30A0A087WSZ9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV30A0A087WSZ9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV30A0A087WSZ9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV30A0A087WSZ9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAV30A0A087WSZ9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV30A0A087WSZ9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV30A0A087WSZ9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV30A0A087WSZ9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 CR559946.2-201ENST00000623684 991 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms