Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav13d-1A0A075B606 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13d-1A0A075B606 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13d-1A0A075B606 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav13d-1A0A075B606 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-1A0A075B606 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-1A0A075B606 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav13d-1A0A075B606 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-1A0A075B606 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-1A0A075B606 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-1A0A075B606 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-1A0A075B606 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.06■□□□□ 0.16
Trav13d-1A0A075B606 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-1A0A075B606 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-1A0A075B606 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-1A0A075B606 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-1A0A075B606 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav13d-1A0A075B606 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav13d-1A0A075B606 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-1A0A075B606 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav13d-1A0A075B606 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-1A0A075B606 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav13d-1A0A075B606 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav13d-1A0A075B606 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-1A0A075B606 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-1A0A075B606 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-1A0A075B606 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-1A0A075B606 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Trav13d-1A0A075B606 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav13d-1A0A075B606 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav13d-1A0A075B606 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav13d-1A0A075B606 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-1A0A075B606 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-1A0A075B606 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-1A0A075B606 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav13d-1A0A075B606 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-1A0A075B606 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-1A0A075B606 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-1A0A075B606 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav13d-1A0A075B606 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-1A0A075B606 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav13d-1A0A075B606 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms