Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.12■□□□□ 0.01
MRPS28Q9Y2Q9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 AL118508.1-201ENST00000613502 2345 ntBASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 AC106886.4-201ENST00000623557 2502 ntBASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 LINC01311-201ENST00000565162 1445 ntBASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 AL023973.1-201ENST00000624619 620 ntBASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 KRT18P22-201ENST00000402024 1347 ntBASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPS28Q9Y2Q9 AC060834.1-201ENST00000443027 2032 ntBASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 AC140113.3-201ENST00000605663 199 ntBASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 AC079602.3-201ENST00000623931 403 ntBASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 TNRC18P3-201ENST00000441896 2691 ntBASIC15.1■□□□□ 0.01
MRPS28Q9Y2Q9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
MRPS28Q9Y2Q9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms