Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS9D1Q9Y2B5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS9D1Q9Y2B5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 LTB4R2-202ENST00000528054 3092 ntBASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 RN7SL718P-201ENST00000581254 303 ntBASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 AC019129.2-201ENST00000609837 1235 ntBASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 AC091076.1-201ENST00000610741 619 ntBASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS9D1Q9Y2B5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 AC233702.3-201ENST00000578656 1387 ntBASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 AC109462.3-201ENST00000573934 613 ntBASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 AC010331.1-201ENST00000611423 582 ntBASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS9D1Q9Y2B5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms