Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.59■■□□□ 1.21
PDZRN3Q9UPQ7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDZRN3Q9UPQ7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDZRN3Q9UPQ7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 AC139713.2-201ENST00000641328 2723 ntBASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 HMGN1P19-201ENST00000436976 333 ntBASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 AC008735.5-201ENST00000623544 497 ntBASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 CEP83-AS1-201ENST00000623122 2482 ntBASIC22.58■■□□□ 1.21
PDZRN3Q9UPQ7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDZRN3Q9UPQ7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDZRN3Q9UPQ7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PDZRN3Q9UPQ7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.58■■□□□ 1.2
PDZRN3Q9UPQ7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PDZRN3Q9UPQ7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.58■■□□□ 1.2
PDZRN3Q9UPQ7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDZRN3Q9UPQ7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 YBX2P1-201ENST00000394192 760 ntBASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 RNA5SP415-201ENST00000517246 115 ntBASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZRN3Q9UPQ7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 AC092910.1-201ENST00000482027 1129 ntBASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 AL139424.1-201ENST00000607572 797 ntBASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 AC100803.2-201ENST00000562459 1963 ntBASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
PDZRN3Q9UPQ7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 AC010327.4-202ENST00000591484 748 ntBASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 AL355385.1-201ENST00000606123 409 ntBASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDZRN3Q9UPQ7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 AC004832.2-201ENST00000426397 482 ntBASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.54■■□□□ 1.2
PDZRN3Q9UPQ7 AC112482.1-201ENST00000492080 688 ntBASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms