Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 AC138894.3-201ENST00000603787 634 ntBASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 AL353593.2-201ENST00000602529 1483 ntBASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.19■□□□□ 0.5
AP4E1Q9UPM8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4E1Q9UPM8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 STK25P1-201ENST00000585406 838 ntBASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 AD001527.2-201ENST00000622994 785 ntBASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4E1Q9UPM8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 AC106820.2-201ENST00000563775 3264 ntBASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
AP4E1Q9UPM8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms